Gene Smed_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0303 
Symbol 
ID5321135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp324710 
End bp325894 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content64% 
IMG OID640789238 
Producthypothetical protein 
Protein accessionYP_001325997 
Protein GI150395530 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.918662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAAA AGCAGGACGT GGTGATCATC GGGGCGGGTG CCGCCGGCAT GATGTGCGCC 
ATCGAGGCAG GCAAGCGGGG GCGCCGCGTG CTCGTACTCG ACCATGCCAA GGCACCCGGT
GAGAAGATCC GCATTTCCGG CGGCGGCCGC TGCAATTTCA CGAACATAGA TGCGAGCCCG
AGAAACTTTC TCTCCGGCAA CCCGCATTTT TGCAAGTCGG CGCTTGCCCG CTACCGGCCG
CAGGACTTTG TCGCGCTCGT CGAGCGCCAT GGCATAAGCT GGCACGAGAA AACGCTCGGG
CAACTCTTCT GCGATCATTC GGCCAAGGAC ATCATCCGCA TGCTGACGGC GGAGATGAGC
GAGGCGGGTG TGCAGTTGGC GCTCGAGACA GCGATTTCGG CGGTCGAGAG GATTGCCTCC
GGCTTCCGTA TCACCACGAG TGCCGGGAGC GTCGACGCCG CGTCGCTGGT CCTGGCGAGC
GGCGGCAAGT CCATCCCGAA GATGGGAGCG ACGGGTTTTG CCTACCGCAT CGCGGAGCAG
TTCGATATGC CGCTCGTCGA AACCCGACCC GCGCTGGTTC CCCTCACGCT CGATCAGGCG
CAGCTTGCGA AGCTCGGCGG GCTTGCCGGT GTTGCGGCAG ATGCCGAGGC CCGGTTCGGG
AAGGAGGCCT TCCGCGAAGC TGTTCTCATT ACCCATCGCG GCCTGAGCGG ACCGGCAATC
CTGCAGATTT CATCCTACTG GCGCGAAGGC GAGGAGATCG TGCTTCGGCT CATGCCGGAC
ATCGATATCG CTTCGATCCT CAAGGGAATG CGCCGGACGA ATGGCCGGCA GGCAGCCCAG
ACGGCTCTTG CCGACATCCT GCCGCGCCGG CTCGCGCAAT TCTTCGCCGA TGAAGCAAAG
GTGACGGGGC GCATGCTTGC CGATCTCTCC GACAAGGCGA TCGACGCGCT TTCCAACTCC
ATTCAGGCCT GGGCGATCAA ACCGGCGGGA TCGGAAGGGT ACCGCACCGC CGAGGTCACG
CTTGGCGGCG TCGATACGCG CGCGCTCGAC TCCCGCAGCA TGCAGACAAG GGAAGTTCCC
GGCCTTTACT TCATCGGCGA GTGTGTCGAT GTGACCGGTT GGCTCGGTGG GTACAATTTT
CAATGGGCGT GGTCGTCGGG CTTCGTCGCC GGTCAAGACG TGTAA
 
Protein sequence
MAEKQDVVII GAGAAGMMCA IEAGKRGRRV LVLDHAKAPG EKIRISGGGR CNFTNIDASP 
RNFLSGNPHF CKSALARYRP QDFVALVERH GISWHEKTLG QLFCDHSAKD IIRMLTAEMS
EAGVQLALET AISAVERIAS GFRITTSAGS VDAASLVLAS GGKSIPKMGA TGFAYRIAEQ
FDMPLVETRP ALVPLTLDQA QLAKLGGLAG VAADAEARFG KEAFREAVLI THRGLSGPAI
LQISSYWREG EEIVLRLMPD IDIASILKGM RRTNGRQAAQ TALADILPRR LAQFFADEAK
VTGRMLADLS DKAIDALSNS IQAWAIKPAG SEGYRTAEVT LGGVDTRALD SRSMQTREVP
GLYFIGECVD VTGWLGGYNF QWAWSSGFVA GQDV