| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0274 |
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| Symbol | |
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| ID | 5321106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 294803 |
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| End bp | 295327 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789209 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001325968 |
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| Protein GI | 150395501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.624808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGCCA CGTCTACATG TAGCGCCTTT GCGAGTGCGG GGGTCTGTGA GCGCGAGATC
GCGTCCGCCG CCGCCAAATA CGGCGTTCCG ACAGGGATAC TCTATTCCGT CGGATTGACC
GAGACGGGGC GCAAAGGGTC CCTGCAGCCC TATGCGATGA ACATCGAAGG CAAGGCCTTT
TTCGGAGCCA GTGCCGAGGA TGTTCTCACG CGTTTCGGGG TCGCGCGCGC CGAGGGCGCC
AAGCTCATTG ATCTCGGCTG CATGCAGATC AATTATCACT TCCACGGCGA GCATTTCAGC
TCCCCGGCGG AGATGCTCGA TCCGCGCAAG AACGTCGAAT ATGCGGCACG TTTTCTGTCC
GACCTCCACG CCAGGCACGA GACCTGGACG ATGGCCGTCG CCCGCTATCA TGCCGGACCG
AATAACGATC CGGCGCAGAA GAAATATGTC TGCCGCGTCA TCGCAAACCT CGTCGCAACC
GGCTATGGCA AGTGGACGCC GAACGCGCAG AGCTTTTGTC AATAA
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| Protein sequence | MLATSTCSAF ASAGVCEREI ASAAAKYGVP TGILYSVGLT ETGRKGSLQP YAMNIEGKAF
FGASAEDVLT RFGVARAEGA KLIDLGCMQI NYHFHGEHFS SPAEMLDPRK NVEYAARFLS
DLHARHETWT MAVARYHAGP NNDPAQKKYV CRVIANLVAT GYGKWTPNAQ SFCQ
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