| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0164 |
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| Symbol | |
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| ID | 5320994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 179573 |
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| End bp | 180220 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789097 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001325858 |
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| Protein GI | 150395391 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.523755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGAAC TGACGATCAT CATCGCTGAC GACCATCCAC TCTTCCGCGG CGCAATGCGC
CAGGCGCTCA GCAGCTTGTC GGGCGCCCCG GCGATCGTCG AGGCCGGAGA TTTCGCAGCT
GCGCGCAAGT CCGCTGCAGA GAATCCGGAA GCCGACCTGA TGTTGCTCGA TCTGACCATG
CCGGGCGTCA GTGGACTTTC GGGATTGATC GCGCTTCGCG CCGAGTTTCC AAGCTTGCCC
GTGATGATCG TCTCTGCTCA TGACGATCCG GCGACCATTC ATCGTGCTCT CGACCTGGGC
GCGGCCGGGT TCCTGTCCAA ATCTGCCGGT ATCGAGGAAA TCCGCGACGG TATCGCAAAG
GTGATGGCGG GCGAGGTGTT CGTGCCGGCC GGTTACGACC GGAATCAGGA ATACGAGCCG
GAAGTTGCCG ATCTGCTGCA TCGGCTGCAG ACGCTGACAC CGCAGCAATC GCGCGTCCTT
TCGATGCTTG CCGAGGGCCT GCTCAACAAG CAGATCGCCT ATGAGCTCGG CGTGTCGGAG
GCGACGATCA AGGCGCATGT CTCGGCTATC CTGCTGAAGC TCAACGTCGA CAGCCGCACG
CAGGCCGTCA TTCAGCTATC GAAGCTCGGC AGCGTGGCTG CGGCTTGA
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| Protein sequence | MPELTIIIAD DHPLFRGAMR QALSSLSGAP AIVEAGDFAA ARKSAAENPE ADLMLLDLTM
PGVSGLSGLI ALRAEFPSLP VMIVSAHDDP ATIHRALDLG AAGFLSKSAG IEEIRDGIAK
VMAGEVFVPA GYDRNQEYEP EVADLLHRLQ TLTPQQSRVL SMLAEGLLNK QIAYELGVSE
ATIKAHVSAI LLKLNVDSRT QAVIQLSKLG SVAAA
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