| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0133 |
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| Symbol | |
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| ID | 5320962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 146933 |
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| End bp | 148117 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789066 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_001325828 |
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| Protein GI | 150395361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.765641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.668156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAGA ATTGGCGCCC GGCAACCCAG CTCGTCCACG GCGGAACGCT GCGTTCCCAG
TACGGCGAGA CCTCCGAAGC GATCTTCCTG ACGCAAGGCT TCGTCTACGA CACCTCCGAA
GCGGCGGAGG CCCGTTTCAA GGGCGAGACT GACGGTTACA TCTATGCGCG TTACGGCAGC
CCGACCAACG ACATGTTCGA AAAGCGCATG TGCATGCTCG AAGGAGCGGA AGACGCGCGT
GCAACCGCCT CCGGCATGGC CGCGGTTTCT GCGGCAATCC TTTGCCAGGT GAAGGCTGGA
GACCATATCG TCGCCGCCCG CGCACTCTTC GGCTCGTGCC GCTGGGTTGT GGAGACGCTG
GCGCCGAAAT ACGGGGTCGA GTGCACGCTG GTGGACGGCC GCGATCTCAA GAACTGGGAA
GACGCAGTGC GTCCGAACAC GAAGGTCTTC TTCCTGGAAA GCCCGACGAA CCCGACGCTG
GAAGTGATCG ACATTGCCGG TGTCGCCAGG CTCGCCGATC AGATCGGCGC CAAGGTGGTG
GTCGACAACG TCTTCGCAAC GCCGCTCTTC CAGAAGCCGC TGGAGCTCGG CGCCCATATC
GTCGTCTATT CCGCGACGAA ACATATCGAT GGCCAGGGTC GCTGCCTCGG CGGCGTGGTT
CTCTCCGACA AGCAGTGGAT CGACGAGAAT CTGCATGATT ACTTCCGTCA CACCGGCCCG
GCCATGTCGC CCTTCAATGC CTGGACGCTA CTGAAGGGGA TCGAGACCCT GCCGCTACGC
GTTAGGCAGC AGACCGAGAG CGCCCGCCGC ATCGCCGACT TCCTCACAGA GCAGCCGCAG
GTCGCACGCG TCATTTATCC GGGCCGCAAG GATCACCCGC AGGCCGACAT TATTGCCAAG
CAGATGAGCG GCGGCTCGAC GCTGGTCGCC TTCGAACTCA AGGGCGGCAA GGAAGCAGCC
TTCGCCCTGC AGAACGCGCT GGAAATCGTT CGGATCTCCA ACAATCTGGG CGATTCCAAG
AGCCTGATCA CCCATCCGGC GACGACGACC CATAAGAACC TTACCGACGA GGCCCGCGCG
GAACTCGGCA TCTCCGCGGG GACCGTGCGC TTCTCGGCTG GAATCGAGGA TAGTGAAGAC
CTCGTCGAGG ACTTCGCGAA GGCACTGAGG AGCGTCACGG CCTAA
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| Protein sequence | MSKNWRPATQ LVHGGTLRSQ YGETSEAIFL TQGFVYDTSE AAEARFKGET DGYIYARYGS
PTNDMFEKRM CMLEGAEDAR ATASGMAAVS AAILCQVKAG DHIVAARALF GSCRWVVETL
APKYGVECTL VDGRDLKNWE DAVRPNTKVF FLESPTNPTL EVIDIAGVAR LADQIGAKVV
VDNVFATPLF QKPLELGAHI VVYSATKHID GQGRCLGGVV LSDKQWIDEN LHDYFRHTGP
AMSPFNAWTL LKGIETLPLR VRQQTESARR IADFLTEQPQ VARVIYPGRK DHPQADIIAK
QMSGGSTLVA FELKGGKEAA FALQNALEIV RISNNLGDSK SLITHPATTT HKNLTDEARA
ELGISAGTVR FSAGIEDSED LVEDFAKALR SVTA
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