Gene Smed_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0122 
Symbol 
ID5320951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp136777 
End bp137592 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content58% 
IMG OID640789055 
Productphosphate transporter ATP-binding protein 
Protein accessionYP_001325817 
Protein GI150395350 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.341225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TGTCGGAAGC TGCAGTCGAA AAGGCTCTTG ACCAGAAAAT GAATACGGTG 
CCCTTCAAGA TGGTCGGCAG GGACGTGTCG GTCTATTACG GCGAGAAGCG CGCGCTTTTC
GACGTCAATC TCGACGTTCG CGAGAATACC GTTACGGCGC TGATCGGTCC CTCCGGTTGC
GGCAAATCGA CGTTTCTGCG CACTTTGAAC CGCATGAACG ACACGATCGA GAACTGCCGC
GTCACCGGCA AGATCACGCT GGACGAGGAC GATATCTACG ATCTGTCGAT CGACGTGGTG
GAACTTCGCG CACGCGTCGG GATGGTGTTT CAGAAACCCA ATCCCTTCCC TAAATCGATC
TATGACAATG TCTCCTACGG TCCGCGCATC CATGGCCTGG CGCGCACCAA GGCCGAACTC
GACGCGGTCG TGGAAACGAG CCTGCAGAAG GCCGGCCTCT GGAACGAGGT CAAAGACCGC
CTTCACGAGC CGGGCACCGG CCTTTCCGGG GGGCAGCAGC AGCGCCTTTG CATCGCCCGC
GCCGTCGCAG TCAGTCCGGA AGTCATATTG ATGGACGAAC CCTGTTCGGC TCTCGATCCG
ATTGCGACCG CGAAAGTGGA GGAACTTATC CACGAATTGC GGGCGAATTT CACGATCGTC
ATAGTCACCC ATTCGATGCA GCAGGCGGCG CGCGTGTCGC AGCGTACGGC CATGTTCCAT
CTCGGCAACC TTGTCGAGGA GAACGATACC GACAAAATGT TCACCAACCC GGACGATCAG
CGCACCCAGG ACTACATCAT GGGCCGCTTC GGCTGA
 
Protein sequence
MNIMSEAAVE KALDQKMNTV PFKMVGRDVS VYYGEKRALF DVNLDVRENT VTALIGPSGC 
GKSTFLRTLN RMNDTIENCR VTGKITLDED DIYDLSIDVV ELRARVGMVF QKPNPFPKSI
YDNVSYGPRI HGLARTKAEL DAVVETSLQK AGLWNEVKDR LHEPGTGLSG GQQQRLCIAR
AVAVSPEVIL MDEPCSALDP IATAKVEELI HELRANFTIV IVTHSMQQAA RVSQRTAMFH
LGNLVEENDT DKMFTNPDDQ RTQDYIMGRF G