Gene Smed_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0105 
SymbolfrcK 
ID5320933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp116241 
End bp116861 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID640789037 
Productputative fructose transport system kinase 
Protein accessionYP_001325800 
Protein GI150395333 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1072] Panthothenate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA AATCCCTTGT GGATGAAATC CTGAAGCGGG CGGCTCAGTC CGGCCGCTTC 
ATTGCCGCCA TAGCCGGTCC GCCCGGCGCA GGTAAGTCCA CGCTTTCGGA AGCGCTTGCC
GGCGCAATCG CCGAGGCGGG GGGGAGCGCG GCGGTGTTGC CGATGGACGG CTTCCACATG
GACAACGCCG TTCTCGTCGA GAAAGGGCTG CTCGCCCGCA AGGGGGCGCC AGAGACCTTC
GACGTCCGAT CCTTTCTCGC AACGCTCGCG GCCGTGCGCG CCGATGACGG GGAAGTTCTC
GTCCCGGTCT TCGACCGCTC CCGGGAACTC GCGATCGCCT CTGCGCGGAT CATCGCGCCT
CAGACGCGCA TCGTCCTTGT CGAGGGCAAC TATCTGCTGC TCGACGAGGC GCCCTGGACC
CGGCTCGACG GCGCGTTCGA CTATACGATC TTCGTCGATC CCGGTCTGGA GGTGCTCGAA
CGGCGACTGC TGCAGCGCTG GTCCGATCAC GGCTTTGACG ACGAAGCGGC GCGCAGCAAG
GCCTATGGCA ACGATATACC AAATGCACGC CGGGTCGTCG AAAGGCGCAG ACCAGCGGAC
ACCGTGATCC GGGACTTCTA G
 
Protein sequence
MSIKSLVDEI LKRAAQSGRF IAAIAGPPGA GKSTLSEALA GAIAEAGGSA AVLPMDGFHM 
DNAVLVEKGL LARKGAPETF DVRSFLATLA AVRADDGEVL VPVFDRSREL AIASARIIAP
QTRIVLVEGN YLLLDEAPWT RLDGAFDYTI FVDPGLEVLE RRLLQRWSDH GFDDEAARSK
AYGNDIPNAR RVVERRRPAD TVIRDF