Gene Smed_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0099 
Symbol 
ID5320927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp110674 
End bp111111 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID640789031 
ProductDoxX family protein 
Protein accessionYP_001325794 
Protein GI150395327 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00508391 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGA ACGTCATCGT GCTCATCGGG CGCATTCTTC TCTCGATCAT CTTTATCACT 
TCCGGCTTCG GAAAACTTAC GGATCCGTCC GGAACGGCCG GTATGATCAC CAATGCCGGC
TGGCCCGCCG CCACGGCGCT TGCATATCTC GCCGGTCTCT TCGAGCTCGT CGCCGGCCTT
GCGATCCTCG TCGGCTTTCA GACGCGCATC GCCTCTTATC TGCTCGCCGC TTTCTGCCTT
GTGACGGCGT TTGTCTTTCA CAGCGGCGCG ATCAATGTCC CGGATTTCCC GCCGGCGGCA
AACGGTCTCC TGACGCTCTT CAACCAGATC ATGATGATGA AGAACGTCAC CATTGCCGGC
GCGTTCCTCG TGCTGGCGGG CTTCGGTCCG GGCTCGCTAT CGCTCGACGC GCGTGCCGGA
ACGGCCGCCA CGGCCTGA
 
Protein sequence
MSQNVIVLIG RILLSIIFIT SGFGKLTDPS GTAGMITNAG WPAATALAYL AGLFELVAGL 
AILVGFQTRI ASYLLAAFCL VTAFVFHSGA INVPDFPPAA NGLLTLFNQI MMMKNVTIAG
AFLVLAGFGP GSLSLDARAG TAATA