Gene Smed_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0080 
SymbolrnpA 
ID5320907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp88367 
End bp88765 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID640789011 
Productribonuclease P 
Protein accessionYP_001325775 
Protein GI150395308 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGGC AAATGACGAC AGATAAAGAC AAGATAGCTG TCGGGCGGCT GAAAAGCCGT 
CCGCAGTTTT TGGCGGTCCG GGCTGGCGAA AGCCGCAGAG GGCCGTTATT TCTTCTCGAG
GTTCTTGACC GGAACGATCC GGAGGGTGAA GCCCGCGTGG GCTTCACCGT TACCAAGAAG
CACGGCAATG CCGTCGAGCG AAATCGGATG CGCCGACGAC TCAAGGAAGC GGTGCGGCTT
TCGGCCGGGT TTGCAATGAA ACCCGGACAC GACTATGTGA TTGTCGCCCG GCGCGATCTC
CTGAATGCCC CATTCGACGC ATTGACTCGG GCGCTTCGGG ATCGCATCGA AATCAAGCCG
AAACAGAAGC GGCCACCGGC CGGTTCCAGG AAATCATGA
 
Protein sequence
MSGQMTTDKD KIAVGRLKSR PQFLAVRAGE SRRGPLFLLE VLDRNDPEGE ARVGFTVTKK 
HGNAVERNRM RRRLKEAVRL SAGFAMKPGH DYVIVARRDL LNAPFDALTR ALRDRIEIKP
KQKRPPAGSR KS