| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0047 |
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| Symbol | trmB |
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| ID | 5320874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 49601 |
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| End bp | 50299 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640788978 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001325742 |
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| Protein GI | 150395275 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.182722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000081132 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAAA CGCGCGGTGC CAGAGCGACG GAGGCCTTCT TCGGTCGCCG GAAGGGCAAA
CCCCTGCGGG AACGCCAGGC GGCACATCTC GAAAACCTGC TGCCTGAATT GAAGATCGAC
CTCGAACACG CGGCTCCGGC CGATTTGAAG GAACTCTTTC CCGTGTCCGT CGAACGCGTT
CGCCTGGAGA TAGGTTTTGG CGGCGGCGAG CACCTGATCC ATCGCGCCGC GGAAGATCCC
GCCACCGGCT TTATCGGCGT GGAACCCTTT GTCAATTCGA TGGCGAAACT GCTCGGGCAG
ATCGAGGCGA AGGCTATTCG CAACATCCGG CTCCATGACG ACGACGCGAC GCAGGTGCTG
GATTGGCTGC CGGCGGCATC CGTCGACCAG ATCGATCTGC TTTATCCCGA CCCCTGGCCG
AAACGGAAGC ACTGGAAGCG GCGTTTCGTC TCCGAGGTCA ACCTCGACCG CTTCGCACGC
ATCCTGAGGC CCGGCGGTGT CTTCTGCTTC GCCTCGGACA TCGACAGCTA TATCAATTGG
ACGCTCATCC ATTGCCGTGA CCACGCGGCC TTCGAATGGA CGGCGGCAGG AGCGGCGGAC
TGGCTGGCAC CCTTTGCCGG ATGGCCAAGC ACCCGCTACG AAGCGAAGGC GCGCAGGGAA
GGGCGCAGTT CGGCCTATTT GAGCTTTCGG CGCAGTTGA
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| Protein sequence | MTETRGARAT EAFFGRRKGK PLRERQAAHL ENLLPELKID LEHAAPADLK ELFPVSVERV
RLEIGFGGGE HLIHRAAEDP ATGFIGVEPF VNSMAKLLGQ IEAKAIRNIR LHDDDATQVL
DWLPAASVDQ IDLLYPDPWP KRKHWKRRFV SEVNLDRFAR ILRPGGVFCF ASDIDSYINW
TLIHCRDHAA FEWTAAGAAD WLAPFAGWPS TRYEAKARRE GRSSAYLSFR RS
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