| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0039 |
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| Symbol | |
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| ID | 5320866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 40085 |
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| End bp | 40954 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640788970 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001325734 |
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| Protein GI | 150395267 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000361849 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAATT GGGTGCGGGT CGCGCTTTGC GGCATGCTGC TCGTCATGAT CTCGCTGGTG
CTGATGCCGG TCCAGATCCT CTGTCTTTGG CTCGATCTGA GGCCCCGACG CTGGCTGCCG
CGCTACTGGC ATCGTGTCGC CTGCCTGTTG CTTGGACTGC GCGTGCGCGT CCATGGCGAG
CTCGATCGCC GCCGCCCCTT GCTCCTAAGC GCAAATCACG TGTCCTGGAA GGACATCCTG
GTGCTTTCCT CCGTGGCGGA CGTCGTCTTC GTCGCCAAGT CGGACGTCAG GTCCTGGCCG
ATTTTCGGGG TTCTCGCCCG CCTTCAGGCA TCGGTTTTCG TGGAACGGGA GCAGAAGCGC
ACCACGGGCA ATCAGGTCAA CGACATCGGA CGGCGGCTCG CCGACGGGGA AATCGTCGTG
CTCTTCCCCG AAGGAACGAC TTCCGACGGC AACCGGCTGC TCGACATCAA ATCCTCGCTG
TTCGGCGCCG CCGCATCGGC CGTCCCGCAA TCGCCGACGG GCGCGGTCCA CGTCCAGCCG
CTTGCGATTT CCTATACCGG CATCCACGGA ATGCCGATGG GCCGCTATTA TCGTCCGATC
GCCGCCTGGC CGGGCGACAT CGGCCTGCTC CCGCACCTTC TCGGCGTGCT GAGAGAGGGC
GCTCTTGAGG TCGACGTCGA TTTCGGCGAG GCGGTGGACT TTGACCGGCA CACCAAACGC
AAGGAGGTGA GCCGCATCAT CGAGCAGCGC ATTCGCGGGA TGCTGTCGGA CCGGCTGCGG
GGGCGCTCCC GATCCACCGC GAAGGGCGAA CCGATTCCCG CAGTCCCTGC CGTGCCGGGC
GTCTCGTCAG ACGTGCAAAG GTCGCGGTAG
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| Protein sequence | MINWVRVALC GMLLVMISLV LMPVQILCLW LDLRPRRWLP RYWHRVACLL LGLRVRVHGE
LDRRRPLLLS ANHVSWKDIL VLSSVADVVF VAKSDVRSWP IFGVLARLQA SVFVEREQKR
TTGNQVNDIG RRLADGEIVV LFPEGTTSDG NRLLDIKSSL FGAAASAVPQ SPTGAVHVQP
LAISYTGIHG MPMGRYYRPI AAWPGDIGLL PHLLGVLREG ALEVDVDFGE AVDFDRHTKR
KEVSRIIEQR IRGMLSDRLR GRSRSTAKGE PIPAVPAVPG VSSDVQRSR
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