| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0032 |
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| Symbol | |
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| ID | 5320859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 34128 |
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| End bp | 35735 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640788963 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001325727 |
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| Protein GI | 150395260 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.819948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000209824 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCTGC TCAAGAAATT CGCGACGGTC GGCGGCGCCA CGCTCGGAAG CCGGCTCTTC
GGCTTCATCC GGGAAACCTT CATGGCGGCC GCGCTCGGCA CGGGTCCGGT CGCCGACGCC
TTCAACACGG CGTTCCGGCT GCCGAACACC TTCCGCAGAC TTTTTGCCGA GGGGGCGTTC
AATTCGGCCT TCGTGCCCCT TTTCGCCAGG GAGATCGAGG CGAGCGGCAT GGATGGCGCC
CGCCGCTTTT CCGAGGAGGT CTTCGGCGTT CTTTTCACCG TTCTTCTTCT GCTGACGATC
GCCATGGAAC TGGCAATGCC TTTCATCGTG GGGGAACTGA TCGCACCTGG ATTTGCCAGT
GATCCGGCCA AGTTCGAGAG CACGGTGACT TTCGCGACCA TCATGTTTCC CTATCTCGCC
TGCATGTCGC TGGCGGCGAT GATGGCGGGC ATGCTGAATT CGCTGCACCG CTATTTCGCG
GCAGCCATCG CGCCGGTCTT TTTGAACTTC ATCCTGATCG GCGTGCTGGC CTACGCCTGG
TATAGCGGCC AGGACGCGGT TGCGGTCGGC CGCGCCCTCT CCTGGGGGGT GCTGGCCGCG
GGGCTGGTTC AGCTCGCGAT CGTCTGGATC GCGGTTCGCA ATGCCGGCAT CCGAATCGGC
TTCCGCCGGC CCCGGCTGAC CGCGAACGTG AAACGCCTGC TCGTGCTGGC CCTCCCCGCG
GCGATAACCG GCGGCATCAC CCAGATCAAC CTGCTGATCA ATACCAATAT AGCCTCGGCA
AAGGAGGGGG CCGTCTCATC GCTCGTCTAT GCCGACCGCA TCTATCAGCT GCCGCTCGGC
GTCGTCGGCA TCGCCGTCGC GACCGTACTT CTGCCCGAGC TGGCGCGCGC TCTGCGCGGA
GGCAATATCA ACGAGGCGGC GAACCTGCAG AACCGTTCCG TCGAGTTCAC CCTGTTCCTG
ACGCTCCCCG CCGCCGCGGC ACTGCTCGTC ATGTCGGAGC CGATCGTCAG GCTCCTCTTC
GAGCGCGGCC AGTTCTCGCC GGAATCGACC GTCGCCGTCG GGCGTATTCT GGCGATCTAC
GGTCTGGGCC TGCCGGCCTT CGTTCTGATC AAGGCCTTCA TACCCGGCTT CTTCGCCCGC
GAGGACACGC GCACGCCAAT GATCTTCGCC GGAATTTCTG TCGCTGTGAA TGTCTCCCTG
GCACTCACGC TTTTTCCGGT GCTGGCAGCG AGCGGCATCG CGATGGCCGA AATCGCCGCG
GGCTGGGTGA ATGCGCTTCT CCTCTTCGCA ACGCTCGTCT GGCGCGGGCA CTGGGGGCGC
GACATCGCTT TGCTGACAAG GATCCCTCGT CTGGTGATCG CGGCTGCAGT CATGGCGGCC
GCATTGATCT TCGCCATAGA CTGGCTCGCA TTTCCGCTTT CTTCGGCCGC ATCGCTTGCG
ACCCGCGCCC TTACCCTTTG CGGGCTGATC GCCGGCGCGA TGGTAATCTA TTTCGCGGTC
GCATTCGGGA TCGGCGGCGC GAGCCTCTCG ATGGTGCGCC GGAGCGTCAA ACGGGGTGCA
TCGGCCTCGT CCGCCGAGCC GGCGGGCAAA GCGGGCGATG AACAATGA
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| Protein sequence | MSLLKKFATV GGATLGSRLF GFIRETFMAA ALGTGPVADA FNTAFRLPNT FRRLFAEGAF
NSAFVPLFAR EIEASGMDGA RRFSEEVFGV LFTVLLLLTI AMELAMPFIV GELIAPGFAS
DPAKFESTVT FATIMFPYLA CMSLAAMMAG MLNSLHRYFA AAIAPVFLNF ILIGVLAYAW
YSGQDAVAVG RALSWGVLAA GLVQLAIVWI AVRNAGIRIG FRRPRLTANV KRLLVLALPA
AITGGITQIN LLINTNIASA KEGAVSSLVY ADRIYQLPLG VVGIAVATVL LPELARALRG
GNINEAANLQ NRSVEFTLFL TLPAAAALLV MSEPIVRLLF ERGQFSPEST VAVGRILAIY
GLGLPAFVLI KAFIPGFFAR EDTRTPMIFA GISVAVNVSL ALTLFPVLAA SGIAMAEIAA
GWVNALLLFA TLVWRGHWGR DIALLTRIPR LVIAAAVMAA ALIFAIDWLA FPLSSAASLA
TRALTLCGLI AGAMVIYFAV AFGIGGASLS MVRRSVKRGA SASSAEPAGK AGDEQ
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