| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0026 |
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| Symbol | |
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| ID | 5320853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 21889 |
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| End bp | 22386 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640788957 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001325721 |
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| Protein GI | 150395254 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000138167 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAGGAAC GAACGCTGTT CTCGCGGCCG CTCCCGATCG CGCTCTTCAT CCTGACCGCG
CTCGCCGCCG ATCAGTTCAT AAAATATCTG GTCGAGGCGT TTCTGCCATT CCAGCAGGGC
GTGCCGGTCG TGCCGATGCT CGCCCTCTAC CGCACCTATA ATTACGGTGT CGCCTTCTCG
ATGCTGTCAG GCATGGAGGG CTGGTTCATC GTCGGCATTC GCCTGGGTGT CGTCACCTTC
GTGCTCTGGC TCTGGCGCCG CACGCCGAAA GACCGTTTCT TCGCCCATCT GGGTTACGCC
ATGATCATTG CCGGCGCGCT CGGCAACCTC GTCGACCGGC TGCTTTTCGG CTATGTCATC
GATTATATCC TGTTCTACAC GGCGACCTGG TCCTTCGCCG TCTTCAACCT TGCGGACAGC
TTCATCACCG TCGGCGCCGG CGCGATCATT CTCGATGAGC TGCTACAAGC GAAAAAGGAA
CGGTCGCTAA AACTTTAG
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| Protein sequence | MQERTLFSRP LPIALFILTA LAADQFIKYL VEAFLPFQQG VPVVPMLALY RTYNYGVAFS
MLSGMEGWFI VGIRLGVVTF VLWLWRRTPK DRFFAHLGYA MIIAGALGNL VDRLLFGYVI
DYILFYTATW SFAVFNLADS FITVGAGAII LDELLQAKKE RSLKL
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