Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0018 |
Symbol | |
ID | 5320845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 16286 |
End bp | 16954 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640788949 |
Product | hypothetical protein |
Protein accession | YP_001325713 |
Protein GI | 150395246 |
COG category | [S] Function unknown |
COG ID | [COG5375] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000157484 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGAACG AAGCGCGATT CCCCGCAACC TTTGCCGAAT CGGGTACGAG TTCTGCCGAT GCTTATGCTT CGGCGGCTCG GCATTCGGCG CGCGTAAAGC GCCTGAAAGT CATCCTTCCG CTGATCGCCG GCCTGATCGC CTTGGTCTTC GCAGCCGTTT CTTTCGTGCG CGCATTTCTG CCCGAAGAGC TGCAGCTCGA GACGGCAACG ATCGAGAACG GCAAGATCGT CATGCAGAAC CCCGCGATAT CCGGCCGCAA CAAGCAGGAT ATCAGCTATT CGATGAAGGC TCAGCGAGCG CTTCAGGATA TTGCCAATCC CAATATCATC ACGCTTGAAA CCATTCATGC GGAGATGCCT GTCAACGACA CGCTGATCGC GACGGTCGAT GCGCAAAGCG GCGTTTACGA TCGCGGCGCA AATACGCTCG ATATGAACGC GCCGTTCACG ATTTCCATGA ATAATGGCGT CATTGCCGAT TTCCAATCCG CCTATCTGGA CATCAATGCC GGCGAAATGG AGACGAAACA CCCGATTGCC ATCAGCATGA CGGGCGGATC GATCATTGCG CAGAAGCTGC GAATGACGGA TAAGGGACGT GTTGTAACAT TTGAAGGTAT GGTAAGGGTC AACATCGAAC CCAGCGCCAT CCGCAAAACC GCGAAATAA
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Protein sequence | MLNEARFPAT FAESGTSSAD AYASAARHSA RVKRLKVILP LIAGLIALVF AAVSFVRAFL PEELQLETAT IENGKIVMQN PAISGRNKQD ISYSMKAQRA LQDIANPNII TLETIHAEMP VNDTLIATVD AQSGVYDRGA NTLDMNAPFT ISMNNGVIAD FQSAYLDINA GEMETKHPIA ISMTGGSIIA QKLRMTDKGR VVTFEGMVRV NIEPSAIRKT AK
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