| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0014 |
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| Symbol | |
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| ID | 5320841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 12312 |
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| End bp | 12884 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640788945 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001325709 |
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| Protein GI | 150395242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.625386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000164852 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTGTGC GCGTGTCTGG GAAACATATG GAAATCGGCG ATTCGTTTCG CGTCCGCATC
GGCGAGCAGA TCGAGCAGGC CGTAACCAAA TATTTCGACG GAGGATATTC GAGCCAGGTC
ACTGTGGAAA AATCCGGGTC GCGCTTCAGC GCCGACTGCA AGCTTCATCT CGATACGGGC
GTGGTATTGC AGGCAAACGG CCAGGCGAAT GAGCCACAGT CAGCCTTCGA CGCGGCTTCG
GAGCGCATCG AGAAACGGCT TCGGCGCTAC AAGCGCAAAC TCAAGGACCA TCACAATGGC
AACGGGCAGA ATGCCACCGA AGTGGCCTAT CGGGTGATGG ACTCGGTGCC CTTCGAGGAC
GACGAAGTTC CCGACGATTA CGCACCGACG ATCGTCGCCG AAACTACGAA ACAGTTGAGA
ACCATGTCCG TTGCCAATGC AGTTATGGCC CTGGACATGA CGGATGAACC GGTGCTGATG
TTCCGCAGCC CCGGCAAGGA CGACCTGAAC ATCGTCTATC GGCGTAACGA TGGGAATATT
GGCTGGATCG ACGCCGCCAA TATCAAGGCA TGA
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| Protein sequence | MSVRVSGKHM EIGDSFRVRI GEQIEQAVTK YFDGGYSSQV TVEKSGSRFS ADCKLHLDTG
VVLQANGQAN EPQSAFDAAS ERIEKRLRRY KRKLKDHHNG NGQNATEVAY RVMDSVPFED
DEVPDDYAPT IVAETTKQLR TMSVANAVMA LDMTDEPVLM FRSPGKDDLN IVYRRNDGNI
GWIDAANIKA
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