| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0013 |
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| Symbol | |
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| ID | 5320840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 11674 |
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| End bp | 12138 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640788944 |
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| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_001325708 |
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| Protein GI | 150395241 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000408387 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCATTGG CAGGCTTGCT GCATCAAAAT GCGATCATCC CGGCCATGAG GGCCAACTCG
AAGAAGCAAC TCCTCCAGGA ACTGGCGGCA AAAGCATCGA AGCTCACCGG TCTTCCGGAG
AGGGAGATCT TCGACGTCAT TCTGCAGCGG GAGCGGCTCG GTTCGACCGG TGTGGGTAAC
GGTATCGCCA TCCCGCACGG GAAGCTCAGC AATCTTCCGT CGATCGTCGG CATCTTTGCG
CGCCTCGATA CGCCGGTCGA TTTCGAGGCA TTGGACGACC AGCCGGTCGA CCTCGTCTTT
CTGCTGCTGG CGCCGGAAGG TGCCGGCGCC GATCACCTGA AGGCGCTGTC GCGGATCGCG
CGCGTGCTGC GCGATCATGA CATGGTGACG CGTATCCGAG CGAGCGACTC GGCAAGCGCG
ATCTACACCC TGCTTGGCGA CGACACGACC TCACACGCTG CCTGA
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| Protein sequence | MALAGLLHQN AIIPAMRANS KKQLLQELAA KASKLTGLPE REIFDVILQR ERLGSTGVGN
GIAIPHGKLS NLPSIVGIFA RLDTPVDFEA LDDQPVDLVF LLLAPEGAGA DHLKALSRIA
RVLRDHDMVT RIRASDSASA IYTLLGDDTT SHAA
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