Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_1024 |
Symbol | |
ID | 5326272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | - |
Start bp | 1051363 |
End bp | 1052706 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640788420 |
Product | prephenate dehydrogenase |
Protein accession | YP_001325214 |
Protein GI | 150401448 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAATAT CAATAATAGG CGGAACAGAT GGATTAGGGA AATGGTTTGC AAAATATTTA AGCAGTAAAG GATATTCTGT AATAGTTAGT GGTAGAGATA AAGAAAAAGG AGAAGCAGTT GAAAAAGAAT TGGGGGTAAT ATATACGCAG GACAATATTG AAGCCACAAA AAAAGGAGAT ATTGTAATTT TGGCAGTTCC TATAAATATT ACTGAATGGA TGATTAAAGA GTTGGCACCC CATGTAAGGG AAAATTGTGT TTTAATGGAT ATTACCTCTA TAAAAGAAAT TCCAACAAAG GCCATGTTAA AATATGCAAA AAAAGATACA TTTATAATGC CCACCCATCC AATGTTTGGA CCTTCTACGC CATCTTTAAG AAGGCAGGTT GTTATATTAA CACCACCTAC CAAGGAACAT GAAAATAACC CCTGGTTTAT TAAAATAAAA AACTTTTTTG AAGAAGAGGG GGCCCGGGTA ATTATAATTC CACCAGAAAA ACATGATAAA ATTATGGGCG TTGTTCAGGG ACTAACTCAT TATTCATATA TAGTTCTTGG TTCGACATTA AGGGAGTTGA ATATAGATAT AAAAGAATCG CGAAAATACG CCTCCCCAAT ATATGAATTA ATGATAAATA TTATAGCAAG AATTATTGGG CAAAATCCTT ATTTGTATGC CGATATACAG ATGCACAATC CACAAATAAA TGATATTCAT CAAACATTTA TAAATGAGTG CGAAAAAATA AAGGAAATAG TTGAAAACAA CGACAGAGAA GCATTTGCAA AACTAATGAA AGAATCCTCA AAACACTTTG GAAATGAAAC TATAAAAGGA ATGAATTATT CTGATAAAGC CGTAGGGGCA ATAACTCGGG AAGTAGATAA GCTAAAAAAA TCAATTGGTA AAGAGGCTGG TTTAAAACAT GCCTACTCCA ATAAAGTTCA TTTTGGAATT GTGAAAGATG TAGTTGATGA TTTTATAATA TTGGATAAAC AAGGCAAGGA TTTAAAATTA AGCATTGCAA ATACCAATTT AATGACAAAA GAAGAATTAA AACAATGGAA GGAGGCAAAT TTAAAAAAAT ATTATAATGA TATTTCATTT TTATTTAAAG ATAATATAGA CATTGATATA ATACTAGAAT TATTAAAAAG TAAATATAAT ATTGAAATAA TTGATGTTTA TAAAGGAGCT CCCATACAGG AAGGATATAA AAGTATCACA TTTAGAATAT ATTCATTTAA AAAACAAGAT TTAGAAAATT TGAGGAGCTC CCTTATAAGA ACTGTGGAAA ATATTGGAGG AATTAAACGA TACAATACAG ATATTTTAAA TTAA
|
Protein sequence | MIISIIGGTD GLGKWFAKYL SSKGYSVIVS GRDKEKGEAV EKELGVIYTQ DNIEATKKGD IVILAVPINI TEWMIKELAP HVRENCVLMD ITSIKEIPTK AMLKYAKKDT FIMPTHPMFG PSTPSLRRQV VILTPPTKEH ENNPWFIKIK NFFEEEGARV IIIPPEKHDK IMGVVQGLTH YSYIVLGSTL RELNIDIKES RKYASPIYEL MINIIARIIG QNPYLYADIQ MHNPQINDIH QTFINECEKI KEIVENNDRE AFAKLMKESS KHFGNETIKG MNYSDKAVGA ITREVDKLKK SIGKEAGLKH AYSNKVHFGI VKDVVDDFII LDKQGKDLKL SIANTNLMTK EELKQWKEAN LKKYYNDISF LFKDNIDIDI ILELLKSKYN IEIIDVYKGA PIQEGYKSIT FRIYSFKKQD LENLRSSLIR TVENIGGIKR YNTDILN
|
| |