| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1023 |
|---|
| Symbol | |
|---|
| ID | 5326455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 1049538 |
|---|
| End bp | 1051169 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640788419 |
|---|
| Product | thermosome |
|---|
| Protein accession | YP_001325213 |
|---|
| Protein GI | 150401447 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGAC CTACAAATGT AATGCCAGAA CATGTAAAAA GATACATGGG AAGAGATGCT
CAAAGAATGA ACATATTAGC AGGAAGAATT ATTGCGGAAA CAGTTAGATC AACATTAGGG
CCAAAAGGAA TGGACAAAAT GTTAGTTGAT GATTTAGGGG ACATAGTTAT CACAAACGAC
GGTGTAACAA TCTTAAAAGA AATGAGTGTT GAACACCCAG CTGCAAAAAT GTTAATTGAA
GTAGCTAAAA CACAGGAGAA GGAAGTAGGT GACGGAACCA CATCCGCAGT TATCGTAGCA
GGAGAATTAT TAAGAAAAGC AGAAGAATTA TTAGACCAAA ATGTTCATCC AACAATGATA
ATCAAAGGAT ACCAGTTAGC ACTTGGAAAA GTTCAGAGCA TATTAAAAGA TATGGCTACA
ACAGTTGATG TAGAAGATAA AGAATTATTA AAGAAAATTG CCATGACTGC AATTACAGGA
AAAGGAGCTG AAAAGGCAAA AGGACATATA GCAGAAATCA TTGTAGATGC TGTAACCTCA
GTTGTTGATG GAGATGGTAA AATCGACACA GACCTCATAA AAATAGAGAA AAAAGAAGGA
ATTGCTGTTG AGGAAACATC ACTAATTAAA GGAATCTTAA TCGACAAAGA AAGAGTAAAT
CCACAAATGC CTAAAAAAGT TGAAGATGCA AAAATCGCAT TATTAAACTG CCCAATTGAA
ATAAAAAGCA CAGAAACAGA TGCAAAAATC AGCATAACCG ACCCTACGAA AATGATGGAA
TTCATTGAAC AAGAAGAAAA AATGTTAAAA GACATGGTTG AAGAAATAAA AGCATCTGGT
GCTAATGTAT TAGTATGTCA AAAAGGAATT GATGACTTAG CTCAGCACTA CCTAGCAAAA
GCTGGAATAT TAGCAATTAG AAGAGTTAAA AAATCAGACA TTGAAAAATT AACAAAAGCG
ACAGGAGCTA ACATTATTTC AAACATTAAA GATTTAACAG CTGATGATTT AGGGGAAGCT
GGCGTTGTAG TAGAAGAAAA AGTTGCCGGA GACAATATGA TATTTGTAAA AGAATGCAAA
CACCCAAAAG CTGTTACAAT CTTAGTTAGA GGAACAACAG AGCATGTAGT TGATGAAGTA
GCAAGAGCTA TTGATGATGC TATTGGAGTT GTTTCATGCA CAATCGAAGA TGGAAAAATA
GTAGCAGGTG GTGGAGCTGT TGAAGTTGAA ACTGCTATGA GATTAAGAGA ATTCGCTGAC
TCCGTAAGCG GAAGAGAGCA ATTAGCAGTT AAAGGATTTG CTGACGCTTT GGAAGTAATA
CCAAGAACAC TAGCAGAAAA TGCTGGATTA GATGCTATTG AAATGTTAGT TAATTTAAGA
GCTAAACATG CAACAGAAGG AAGCACAACA TTTGGATTAA ATGTATTAAC CGGAGAAGTT
GAAGATATGG CTGCAAATGG AGTAGTTGAA CCATTAAGAG TTAAAACACA AGCTATACAA
TCTGCAACAG AATCCGCTGA AATGTTATTA AGAATTGACG ATGTAATTGC TGCTGAAAAA
TTAGGCGGTG GAGATATGCC TGCTGATATG GGCGGAATGG GAGGAATGGG CGGTATGCCA
GGAATGATGT AA
|
|---|
| Protein sequence | MSGPTNVMPE HVKRYMGRDA QRMNILAGRI IAETVRSTLG PKGMDKMLVD DLGDIVITND
GVTILKEMSV EHPAAKMLIE VAKTQEKEVG DGTTSAVIVA GELLRKAEEL LDQNVHPTMI
IKGYQLALGK VQSILKDMAT TVDVEDKELL KKIAMTAITG KGAEKAKGHI AEIIVDAVTS
VVDGDGKIDT DLIKIEKKEG IAVEETSLIK GILIDKERVN PQMPKKVEDA KIALLNCPIE
IKSTETDAKI SITDPTKMME FIEQEEKMLK DMVEEIKASG ANVLVCQKGI DDLAQHYLAK
AGILAIRRVK KSDIEKLTKA TGANIISNIK DLTADDLGEA GVVVEEKVAG DNMIFVKECK
HPKAVTILVR GTTEHVVDEV ARAIDDAIGV VSCTIEDGKI VAGGGAVEVE TAMRLREFAD
SVSGREQLAV KGFADALEVI PRTLAENAGL DAIEMLVNLR AKHATEGSTT FGLNVLTGEV
EDMAANGVVE PLRVKTQAIQ SATESAEMLL RIDDVIAAEK LGGGDMPADM GGMGGMGGMP
GMM
|
|---|
| |