Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_1008 |
Symbol | |
ID | 5326526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | + |
Start bp | 1035059 |
End bp | 1036231 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640788404 |
Product | L-tyrosine decarboxylase |
Protein accession | YP_001325198 |
Protein GI | 150401432 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.461391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGAAA GAGCGGTTTT AGAAGAGTTA AAGAAATATA GAAAAATGGA TTTAAAATAT GAAGATGGTG CAATTTTGGG GTCTATGTGC ACAAAACCAC ACCCAATCAC AAAAAAAATA AGCGATATGT TTTTTGAGAC CAATTTAGGA GACCCTGGGC TATTTAGGGG AACAAAAAAA TTGGAGGATG AAGTAATAAA TAATATTGGA AAATTTTTAA ATAATCCAAA TCCTTTTGGA TATATTATTT CAGGCGGAAC TGAGGCAAAT ATTACGGCAA TGAGGGCAAT AAACAATATT GCCAAAGCTA AACGGAAAAA TCATAAAACA ACAGTTATCA TGCCAGAAAC AGCCCATTTT TCATTTGAAA AAGCCCGGGA AATGATGGAT TTAAATCTGA TAACCCCTCC ACTAACTAAA TATTATACAA TGGATTTAAA ATATATTAAT GATTTTATAG AGGATAGGAA TAATAAAAAT GACATCTCTG TTGACGGAAT AGTTGGCATA GCTGGATGTA CGGAGCTTGG GGCAATTGAT AATATAAAGG AGCTCTCAAA AATAGCCGAA CAAAATAATA TATTTTTGCA TGTTGATGCG GCATTTGGTG GTTTCGTAAT ACCATTTTTA GATGACAAAT ATAAATTAGA CAATTATTGT TATGAATTTG ATTTCTCATT AAATGGTGTT AAATCCATGA CAGTAGACCC TCACAAAATG GGATTAGCTC CAATTCCTGC TGGGGGCATA TTATTTAGAG ATAAATCATT TAAAAAATAT TTAGATGTGG AAGCTCCCTA TTTAACTGAC ATACATCAGG CAACGATAAT AGGAACAAGA AGTGGAGTTG GAGTTGCATC TACATGGGGA GTTATGAAAT TATTTGGGGA AGAAGGATAT AAAAATTTAG CTTCTGAATG CATGGATAAA ACCCACTATT TAGTAAAAGA AGCTAAAAAA TTAGGATTTA AACCAGTTAT AGACCCAGTT TTAAATATTG TAGCGTTGGA GGATGATAAT CCAGAAGAAA CTAGTTTAAA ACTTAGAAAA ATGGGCTGGT TTATATCTAT TTGTAAATGT GTTAAAGCTC TTAGAATAAT AGTTATGCCC CATGTTGAAA AAGAACATAT TGATAAATTT TTGGGAGCCC TAACCGAAGT TAAAAAAAAT TAA
|
Protein sequence | MDERAVLEEL KKYRKMDLKY EDGAILGSMC TKPHPITKKI SDMFFETNLG DPGLFRGTKK LEDEVINNIG KFLNNPNPFG YIISGGTEAN ITAMRAINNI AKAKRKNHKT TVIMPETAHF SFEKAREMMD LNLITPPLTK YYTMDLKYIN DFIEDRNNKN DISVDGIVGI AGCTELGAID NIKELSKIAE QNNIFLHVDA AFGGFVIPFL DDKYKLDNYC YEFDFSLNGV KSMTVDPHKM GLAPIPAGGI LFRDKSFKKY LDVEAPYLTD IHQATIIGTR SGVGVASTWG VMKLFGEEGY KNLASECMDK THYLVKEAKK LGFKPVIDPV LNIVALEDDN PEETSLKLRK MGWFISICKC VKALRIIVMP HVEKEHIDKF LGALTEVKKN
|
| |