Gene Maeo_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_1008 
Symbol 
ID5326526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp1035059 
End bp1036231 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content32% 
IMG OID640788404 
ProductL-tyrosine decarboxylase 
Protein accessionYP_001325198 
Protein GI150401432 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.461391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA GAGCGGTTTT AGAAGAGTTA AAGAAATATA GAAAAATGGA TTTAAAATAT 
GAAGATGGTG CAATTTTGGG GTCTATGTGC ACAAAACCAC ACCCAATCAC AAAAAAAATA
AGCGATATGT TTTTTGAGAC CAATTTAGGA GACCCTGGGC TATTTAGGGG AACAAAAAAA
TTGGAGGATG AAGTAATAAA TAATATTGGA AAATTTTTAA ATAATCCAAA TCCTTTTGGA
TATATTATTT CAGGCGGAAC TGAGGCAAAT ATTACGGCAA TGAGGGCAAT AAACAATATT
GCCAAAGCTA AACGGAAAAA TCATAAAACA ACAGTTATCA TGCCAGAAAC AGCCCATTTT
TCATTTGAAA AAGCCCGGGA AATGATGGAT TTAAATCTGA TAACCCCTCC ACTAACTAAA
TATTATACAA TGGATTTAAA ATATATTAAT GATTTTATAG AGGATAGGAA TAATAAAAAT
GACATCTCTG TTGACGGAAT AGTTGGCATA GCTGGATGTA CGGAGCTTGG GGCAATTGAT
AATATAAAGG AGCTCTCAAA AATAGCCGAA CAAAATAATA TATTTTTGCA TGTTGATGCG
GCATTTGGTG GTTTCGTAAT ACCATTTTTA GATGACAAAT ATAAATTAGA CAATTATTGT
TATGAATTTG ATTTCTCATT AAATGGTGTT AAATCCATGA CAGTAGACCC TCACAAAATG
GGATTAGCTC CAATTCCTGC TGGGGGCATA TTATTTAGAG ATAAATCATT TAAAAAATAT
TTAGATGTGG AAGCTCCCTA TTTAACTGAC ATACATCAGG CAACGATAAT AGGAACAAGA
AGTGGAGTTG GAGTTGCATC TACATGGGGA GTTATGAAAT TATTTGGGGA AGAAGGATAT
AAAAATTTAG CTTCTGAATG CATGGATAAA ACCCACTATT TAGTAAAAGA AGCTAAAAAA
TTAGGATTTA AACCAGTTAT AGACCCAGTT TTAAATATTG TAGCGTTGGA GGATGATAAT
CCAGAAGAAA CTAGTTTAAA ACTTAGAAAA ATGGGCTGGT TTATATCTAT TTGTAAATGT
GTTAAAGCTC TTAGAATAAT AGTTATGCCC CATGTTGAAA AAGAACATAT TGATAAATTT
TTGGGAGCCC TAACCGAAGT TAAAAAAAAT TAA
 
Protein sequence
MDERAVLEEL KKYRKMDLKY EDGAILGSMC TKPHPITKKI SDMFFETNLG DPGLFRGTKK 
LEDEVINNIG KFLNNPNPFG YIISGGTEAN ITAMRAINNI AKAKRKNHKT TVIMPETAHF
SFEKAREMMD LNLITPPLTK YYTMDLKYIN DFIEDRNNKN DISVDGIVGI AGCTELGAID
NIKELSKIAE QNNIFLHVDA AFGGFVIPFL DDKYKLDNYC YEFDFSLNGV KSMTVDPHKM
GLAPIPAGGI LFRDKSFKKY LDVEAPYLTD IHQATIIGTR SGVGVASTWG VMKLFGEEGY
KNLASECMDK THYLVKEAKK LGFKPVIDPV LNIVALEDDN PEETSLKLRK MGWFISICKC
VKALRIIVMP HVEKEHIDKF LGALTEVKKN