Gene Maeo_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_1005 
Symbol 
ID5326661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp1029980 
End bp1031683 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content34% 
IMG OID640788401 
Productpyruvate carboxylase subunit B 
Protein accessionYP_001325195 
Protein GI150401429 
COG category[C] Energy production and conversion 
COG ID[COG5016] Pyruvate/oxaloacetate carboxyltransferase 
TIGRFAM ID[TIGR01108] oxaloacetate decarboxylase alpha subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAA TTACGGATAC CACTCTTAGA GATGCACACC AATCTTTAAT CGCTACAAGA 
TTAAGAACCG AAGACATGAT ACCCATCGCT GAGAAAATGG ATGAAGTAGG ATTTTATTCC
ATGGAAGTTT GGGGGGGTGC TACTTTTGAT TCCTGTATTA GATATTTAAA TGAAGACCCA
TGGGAAAGAT TAAGGGCACT TAGAAAAAGA GTTCAAAAAA CACCATTGCA AATGCTTCTT
AGAGGGCAAA ATTTAGTTGG ATACAAACAT TATTCAGACG ACATAGTAGA AAAATTCATT
GAAAAGTCAT ATGAAAATGG AATAGAGATA TTTAGAATAT TTGATGCATT AAATGACATA
AGAAATTTAG AAGTATCAAT TAAGGCTGCA AAAAAATGCG GAGCTCATGT TCAGGGAGCT
ATATCCTACA CAATAAGTCC AGTTCATACC ATAGATCAAT ATATATCACT TGCTAAGAAA
TTTGAAGAAC TTGAATGTGA TTCATTATGT ATAAAAGATA TGGCTGGGCT TTTAAAACCT
TATGATGCCA AAATATTAAT AAAAAGGTTG AAAAAAGAAA TATCTATACC AATCAATTTG
CATAGCCATT GTACAAGTGG ATTAGCTCCA ATGACATACA ATGCCGCAAT TGAAGCCGGT
GTTGATATAG TGGATTGTGC CATTTCTCCA TTATCAATGG GAACATCTCA ACCACCAACT
GAAACATTTG TTTCGGCATT TAAAGGAACA AAATTTGATA CGGGATTAGA TACTGCTCTT
TTAAATAAAA TTAGGGAATA CTTCGACGAA ATTAGAAATA AATACAAATA TTTAATAAAC
CCAATTTCAG AAAGAATCGA TTCAAGAGTT TTGGTTTATC AAGTTCCAGG GGGAATGTTG
TCAAATCTTG TATCTCAATT AAAGGAACAG GGAGCCCTGG ATAAATTCGA AGAAGTTCTT
AATGAAATAC CACTAGTTAG AAAAGATTTA GGATATCCGC CACTTGTAAC CCCATCATCC
CAAATCGTAG GGACGCAGGC AGTAATGAAT GTTATTACTG GTGAAAGATA CAAAGTAATT
ACAAATGAAG TTTCAAACTA TGTAAAAGGA CTTTATGGGA AACCGCCTGC AAAAATAGAT
AGAGACCTTA AAAAAAGAGT TTTAGATAGC GAAGAAAAAG CAATTACCTG CAGACCTGCT
GATTTATTAA AACCAGAATA TGAAAAAATC AAAGCCGATG CAGAGAGCAA AGGAATTGTG
TCAAAAGAAG AGGACATATT AACTTATGCA TTATATCCAC AAGTTGCCGT TAAGTTTTTA
AGAGGGGAGC TCCAAGCCGA ACCAATACCT GATGAAAAGG AAGTGGCCAA ATTCATGGAA
ATTCCAACAG AATATATTGT AGAAGTAGAT GGAGACGAAT TCGAAGTTAA AATCAAACCA
AGATATGGAA CAGAAATGAA GAAAAAAGAA GATAAAATCA CCGCCGACAC AGAAGGTGCT
TTAACTTCGC CATTTAGAGG AATGATTACC CAAATAAAAG TTAAAGAAGG AGATGAAGTT
AAAGAAGGAG ATACCTTAAT GATATTGGAA GCCATGAAAA TGGAAAATCC TGTGGGAGCT
CCTGCTGATG GAAAAGTTAA AAAAATAGTT GTTCATGAAG GTCAGTCTGT CAATGTAGGA
GACATACTTA TGATTATAAT ATAA
 
Protein sequence
MVKITDTTLR DAHQSLIATR LRTEDMIPIA EKMDEVGFYS MEVWGGATFD SCIRYLNEDP 
WERLRALRKR VQKTPLQMLL RGQNLVGYKH YSDDIVEKFI EKSYENGIEI FRIFDALNDI
RNLEVSIKAA KKCGAHVQGA ISYTISPVHT IDQYISLAKK FEELECDSLC IKDMAGLLKP
YDAKILIKRL KKEISIPINL HSHCTSGLAP MTYNAAIEAG VDIVDCAISP LSMGTSQPPT
ETFVSAFKGT KFDTGLDTAL LNKIREYFDE IRNKYKYLIN PISERIDSRV LVYQVPGGML
SNLVSQLKEQ GALDKFEEVL NEIPLVRKDL GYPPLVTPSS QIVGTQAVMN VITGERYKVI
TNEVSNYVKG LYGKPPAKID RDLKKRVLDS EEKAITCRPA DLLKPEYEKI KADAESKGIV
SKEEDILTYA LYPQVAVKFL RGELQAEPIP DEKEVAKFME IPTEYIVEVD GDEFEVKIKP
RYGTEMKKKE DKITADTEGA LTSPFRGMIT QIKVKEGDEV KEGDTLMILE AMKMENPVGA
PADGKVKKIV VHEGQSVNVG DILMIII