Gene Maeo_0987 details

Gene Information

• Locus tag: Maeo_0987
• ID: 5326971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: +
• Start bp: 1013381
• End bp: 1013896
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 640788381
• Product: 2'-5' RNA ligase
• Protein accession: YP_001325177
• Protein GI: 150401411
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1514] 2'-5' RNA ligase
• TIGRFAM ID: [TIGR02258] 2'-5' RNA ligase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0381875
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATGCT TTTTAGCCAT TGAATTAACA GATAAATTAA AAGAAAAAAT TGGAGAATTA 
CAAAACAATT TTAAAATAAA TGGCATTAAG TCGGTAGAAA AAGAAAATTT ACATATTACG 
GTTAAATTTT TAGGAGATAT TGATGATGAT AAGCTGGAAA AAATAAAACT CGTTGATTTA 
TCTATCAATC CAGTTAACAC ACCAATTAAA GAAGTGGGAG TATTTCCCAA TGAAAATTAT 
ATAAAAATTA TTTGGGTAGG AGCTCCCAAA TTAACAAACA CACTAAAAGA AATTGACGAG 
AAAATTTCAG AACTTGGCTT TAAAAAAGAA AGAAGCTATA TTCCCCATAT CACAATTGGG 
AGAGTAAAAT TTATTAAAGA TAAAAACCAT TTAAAAGAAA AAATTGAAAA ATATAAAAAT 
ATTAAATTTG ATAATTTAGA AGTTAAAAAT ATTGTTTTAA TTGGTAGCCA ATTAACGGAA 
AAAGGACCGA TTTATACAAC AATTAAAAAA TGGTAA 

 

Protein sequence

MRCFLAIELT DKLKEKIGEL QNNFKINGIK SVEKENLHIT VKFLGDIDDD KLEKIKLVDL 
SINPVNTPIK EVGVFPNENY IKIIWVGAPK LTNTLKEIDE KISELGFKKE RSYIPHITIG 
RVKFIKDKNH LKEKIEKYKN IKFDNLEVKN IVLIGSQLTE KGPIYTTIKK W