Gene Maeo_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_0842 
Symbol 
ID5327457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp869497 
End bp870711 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content31% 
IMG OID640788238 
Producthypothetical protein 
Protein accessionYP_001325036 
Protein GI150401270 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain
[TIGR03266] putative methanogenesis marker protein 1
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0167577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGACT CAATAAATTA TAATGTAGAA ACATACAGAG TTTGCTCTCC CGAAGAAACT 
TGGAACAAGA TAAAATCATT AACAAAAAAT ATAAATATTG AAATTTTAGA AAGAATTGAC
AATTTAGATA GAATTGGAAT TCCAGTTTAT TCTGCAAAAA GAATTGTAAA AAGCCCCGAA
AATGAAAATG ATACAAAAGA AAAAATAGTA AAATATCATT ATGGTAAAGG AGCTACGGAC
ATTCAAGCAA AGGTTTCGGC AATAATGGAG GCAATTGAAA GATATTCCAT GGGATGCCTT
AATGAACCCG CTACCAAAAA TCCAGAAAAT CCAATAGATT TAAAGGAGTT GGTGCTATCC
AAAGAATCAT ATAAAAATAT AAATCAAATA AATAATAATA TAAATAATAT TGAATGGACA
GCCTGCCATG ACATAATTAA CGATGAAATT ATCGATATTC CTGTAAATGC CGTATGCCAC
CCCACAGAGG GAAAGCTTTT TAAAAGTAAT ACTAATGGAA TAGCATCAGG AAACACAAAA
GATGAAGCGA TTTTCCACGG CACCCTTGAA TTAATAGAAA GAGATTCTTG GAGTATAGCC
GAAATATACA ATAAAACCCA CACAAAAATA AACACAGATG GGGCAAAAAA TCCAATAATA
CACGAATTAA TGGATAAATT TAAAGATGCC AATATAAATG TAGTTTTAAA GGATTTAACT
AGTGATATTG GTATCCCCAC AGTTGCCGCC GTATCTGATG AACCTGTTTT AAAAGACCCT
GCTTTATTGT GTATTGGAGT AGGTTGCCAC ATTAATCCAG AAATAGCAGT AATTAGGGCA
CTTACAGAAG TAATTCAAAG TAGGGCCACC CAAATACAAA ATAAGAGAGA CGATACAATT
AGAGGAGATA TTGTACGAAA GGTCCAATAT GATAGACTGA TAAAAGTCCA TAGAAAATGG
TATGGGCATA AAGATGAGAT AAATATAGAG GAGCTCCCAA ATAATGCAAA ATTAAATTTA
AAAAAGGACC TAAATGTCAT TAAAAATAAA TTAATTGATA CGGGATTCGA TAAATTAATT
GTTGCTGATT TGAAAAAACC AGAAGTTGGA ATTGATGTTG TTAGAATAAT AATTCCTAAA
ATAGAAGTTT ATTGTATGGA TAGAGATAGA ATTTCACCTT GGATAAGAGA AAGAATGAAA
AATATTAAAA ATTAA
 
Protein sequence
MYDSINYNVE TYRVCSPEET WNKIKSLTKN INIEILERID NLDRIGIPVY SAKRIVKSPE 
NENDTKEKIV KYHYGKGATD IQAKVSAIME AIERYSMGCL NEPATKNPEN PIDLKELVLS
KESYKNINQI NNNINNIEWT ACHDIINDEI IDIPVNAVCH PTEGKLFKSN TNGIASGNTK
DEAIFHGTLE LIERDSWSIA EIYNKTHTKI NTDGAKNPII HELMDKFKDA NINVVLKDLT
SDIGIPTVAA VSDEPVLKDP ALLCIGVGCH INPEIAVIRA LTEVIQSRAT QIQNKRDDTI
RGDIVRKVQY DRLIKVHRKW YGHKDEINIE ELPNNAKLNL KKDLNVIKNK LIDTGFDKLI
VADLKKPEVG IDVVRIIIPK IEVYCMDRDR ISPWIRERMK NIKN