Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_0842 |
Symbol | |
ID | 5327457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | + |
Start bp | 869497 |
End bp | 870711 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640788238 |
Product | hypothetical protein |
Protein accession | YP_001325036 |
Protein GI | 150401270 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03266] putative methanogenesis marker protein 1 [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0167577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGACT CAATAAATTA TAATGTAGAA ACATACAGAG TTTGCTCTCC CGAAGAAACT TGGAACAAGA TAAAATCATT AACAAAAAAT ATAAATATTG AAATTTTAGA AAGAATTGAC AATTTAGATA GAATTGGAAT TCCAGTTTAT TCTGCAAAAA GAATTGTAAA AAGCCCCGAA AATGAAAATG ATACAAAAGA AAAAATAGTA AAATATCATT ATGGTAAAGG AGCTACGGAC ATTCAAGCAA AGGTTTCGGC AATAATGGAG GCAATTGAAA GATATTCCAT GGGATGCCTT AATGAACCCG CTACCAAAAA TCCAGAAAAT CCAATAGATT TAAAGGAGTT GGTGCTATCC AAAGAATCAT ATAAAAATAT AAATCAAATA AATAATAATA TAAATAATAT TGAATGGACA GCCTGCCATG ACATAATTAA CGATGAAATT ATCGATATTC CTGTAAATGC CGTATGCCAC CCCACAGAGG GAAAGCTTTT TAAAAGTAAT ACTAATGGAA TAGCATCAGG AAACACAAAA GATGAAGCGA TTTTCCACGG CACCCTTGAA TTAATAGAAA GAGATTCTTG GAGTATAGCC GAAATATACA ATAAAACCCA CACAAAAATA AACACAGATG GGGCAAAAAA TCCAATAATA CACGAATTAA TGGATAAATT TAAAGATGCC AATATAAATG TAGTTTTAAA GGATTTAACT AGTGATATTG GTATCCCCAC AGTTGCCGCC GTATCTGATG AACCTGTTTT AAAAGACCCT GCTTTATTGT GTATTGGAGT AGGTTGCCAC ATTAATCCAG AAATAGCAGT AATTAGGGCA CTTACAGAAG TAATTCAAAG TAGGGCCACC CAAATACAAA ATAAGAGAGA CGATACAATT AGAGGAGATA TTGTACGAAA GGTCCAATAT GATAGACTGA TAAAAGTCCA TAGAAAATGG TATGGGCATA AAGATGAGAT AAATATAGAG GAGCTCCCAA ATAATGCAAA ATTAAATTTA AAAAAGGACC TAAATGTCAT TAAAAATAAA TTAATTGATA CGGGATTCGA TAAATTAATT GTTGCTGATT TGAAAAAACC AGAAGTTGGA ATTGATGTTG TTAGAATAAT AATTCCTAAA ATAGAAGTTT ATTGTATGGA TAGAGATAGA ATTTCACCTT GGATAAGAGA AAGAATGAAA AATATTAAAA ATTAA
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Protein sequence | MYDSINYNVE TYRVCSPEET WNKIKSLTKN INIEILERID NLDRIGIPVY SAKRIVKSPE NENDTKEKIV KYHYGKGATD IQAKVSAIME AIERYSMGCL NEPATKNPEN PIDLKELVLS KESYKNINQI NNNINNIEWT ACHDIINDEI IDIPVNAVCH PTEGKLFKSN TNGIASGNTK DEAIFHGTLE LIERDSWSIA EIYNKTHTKI NTDGAKNPII HELMDKFKDA NINVVLKDLT SDIGIPTVAA VSDEPVLKDP ALLCIGVGCH INPEIAVIRA LTEVIQSRAT QIQNKRDDTI RGDIVRKVQY DRLIKVHRKW YGHKDEINIE ELPNNAKLNL KKDLNVIKNK LIDTGFDKLI VADLKKPEVG IDVVRIIIPK IEVYCMDRDR ISPWIRERMK NIKN
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