| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0649 |
|---|
| Symbol | |
|---|
| ID | 5327696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | - |
|---|
| Start bp | 665821 |
|---|
| End bp | 667506 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640788039 |
|---|
| Product | S-layer protein |
|---|
| Protein accession | YP_001324845 |
|---|
| Protein GI | 150401079 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01564] S-layer protein, MJ0822 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGA GCTTAAAGAA AATAGGAGCA ATGGCAGTAG GAGGAGCTAT GGTAGCTTCC
GCATTAGCAA GTGGTGCTAT GGCAGCAGCT ACAACATCAG GAGATGTTTC AGGATTTATG
GCAAATGCAG TTAAAGACGG ACAGCCAAAT GTAGATATTG TAGTAGGTTC AAACGCAGCA
ACAAGCGATG TTGTTTCAGC AACAAATATT GGAGCAAAAA TCGGTTCAAT GTGCTACAAA
ACAGGAGCAG TTACAGATGG AAGTGCAGAA TTAAATGTTC ATGTTTCATC TGAAACTGAT
TTAACAAGTA ATTTAAATGC TTATGCAAAT GGTAATCAAT TCGCAATATT TACAACATCA
AAAAGAAGTT ATACAACAAG TTTGGGAACT ACTACTATAG TGGGTAACAG CAATGTTGTA
GCTGATGCAG CAGGTGCAGG GTTAATTGAA AATTTACCGA GATTATCCAC CTTGACAAGA
AGTAAAGATA TAGATCCTTC TGATGTTAGT GATGATGATT CAGCAGATGC AACAGAATTT
TTGTTGGCGT CAGTTCTCAA AAATGGAGCA GATGATTATG ATATTAACAA AGGAAACTTA
GTATATGGTA CTGTTGCATT TAAAGACGGA AAAGATGCAA TGGCAAATGA TCAAGACCTA
TATCTTGGAA TGGAAATACC TTTCCTTGGA GATGCTACAA CAATTGTGGA TACTGACGAT
GCTACAATAT ATTTAGGTAA AAAAGCATAC GATGGAAATA TTAAAGAAGG CGAATCCTAT
GATTTAGGAA ACGGATACAC CGTAAAAGTT AAAAGTGTCT TAATACCACT TGGAGGGGGA
AATCCACAAG TAGATGTTGC AATATTAAAA GATGGAAAAG AAGTTGCATC CAAAGATGAC
CAAGCACCAT TTGAATTAAG AAGTGGAGAT ATTGGAGTAA ATGTATATGA TGCATTCAAA
GATGTTGGAG GAAACTATGG GTACGCATCA TTGATAATCT CAAAAGATGT AAAAGGTTAT
GACTTAGGAG ATGAATATAT AAAAGATTGG AAATTATATG CTGTAACAGA TAATGCAGGA
AACCTTGATT TATCCGATAA TGACTTAAAG GAAGATAAGA CACAACTTAA TGCAGGAAAT
TCAAAAGAAA AAAGTTTAAC AGATGGTACA AACAAGGTTA TTGGTCTTGC ATTAAAATAT
GATGGAGATA AAATAGAAAC ATTGAAAGAT GGAAAATCAG CAGACTTTGT AAACAATTAC
GCAAGTTTGA AATTTACAGA CGATGACTCA TCACCTAGTT TATTTGCAAA ATATGAGATG
GATGTATCAA AAGATGCAAC ATTAAGCGTT GGACAAAAAG CATCAGTATT AAACGCAGAT
ATCAAATTAA ATGACCTCAA AGCAACTGCA CAACAAATGG TTCCAGTAAC AGCACCAATT
GCAAAATTGG ACAGTGAAGT TACATTAGAC ACAGCAGACA AAAACTTAAT AGTAGTTGGG
GGACCTGTTG TAAACAAATT AGCAGAAGCT TTACAAACAG CTGGTAAAAT TACAATTGAT
AACACAAGCC CAGCAACATT GGCAGTAGTT GATAACGCAG CAAACGGAAA CGATGTTTTA
GTTGTTGCAG GTGGGGACAG AGCAGCTACA AGAGAAGCAG CATTAGAATT AATTAAAAAC
TACTAA
|
|---|
| Protein sequence | MSMSLKKIGA MAVGGAMVAS ALASGAMAAA TTSGDVSGFM ANAVKDGQPN VDIVVGSNAA
TSDVVSATNI GAKIGSMCYK TGAVTDGSAE LNVHVSSETD LTSNLNAYAN GNQFAIFTTS
KRSYTTSLGT TTIVGNSNVV ADAAGAGLIE NLPRLSTLTR SKDIDPSDVS DDDSADATEF
LLASVLKNGA DDYDINKGNL VYGTVAFKDG KDAMANDQDL YLGMEIPFLG DATTIVDTDD
ATIYLGKKAY DGNIKEGESY DLGNGYTVKV KSVLIPLGGG NPQVDVAILK DGKEVASKDD
QAPFELRSGD IGVNVYDAFK DVGGNYGYAS LIISKDVKGY DLGDEYIKDW KLYAVTDNAG
NLDLSDNDLK EDKTQLNAGN SKEKSLTDGT NKVIGLALKY DGDKIETLKD GKSADFVNNY
ASLKFTDDDS SPSLFAKYEM DVSKDATLSV GQKASVLNAD IKLNDLKATA QQMVPVTAPI
AKLDSEVTLD TADKNLIVVG GPVVNKLAEA LQTAGKITID NTSPATLAVV DNAANGNDVL
VVAGGDRAAT REAALELIKN Y
|
|---|
| |