| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0090 |
|---|
| Symbol | |
|---|
| ID | 5327252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | - |
|---|
| Start bp | 93949 |
|---|
| End bp | 94581 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640787485 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_001324294 |
|---|
| Protein GI | 150400528 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATATTC CTGATGGATT TTTACCGATA TGGGAAGCCG GATTATTATG GCTTGTTTCA
TTGGTATGTA TTGGTTTGTC CCTTAAATGG GCATCAAAAG AAATGAATGA AAAAACAGTC
CCTCTTTTTG CAGCAGTGGC AGCAGGTATA TTTGCTATTC AAGCTATGAA TATACCAATA
CCATGGGGAA CCAGCGGACA TATGGGCGGT GCGGCATTAG CATCTATCAT ATTTGATAGT
CCCTGGGCTG GTGTGTTAAT GTTAGCTCTT GTGTTAATTG TTCAAGGTTT ATTCTTTGCA
GATGGAGGAA TATTGGCAAT GGGTGCAAAT GTATTCAATA TGGGTATAAT TAGTGCATTT
GTTGGATATT ATGTATTTAA ATCACTTAAA AAGGTAAATA TTGCCGTTGC AGCATTTGGT
GCCGGTTGGT TTGCTTTATT CCTAGGTGCT ATTGTTTGTG CTATTGAAAT GGCAGTTGCT
GGAACATTCC CATTAGATAA AGGATTACAG TTCATGGGAT TATACCATGC AGCAATAGGA
TTTATTGAAG GAGGTATAAC GGCAGTAGTA ATTCAATATA TATCCTCAGT TAGACCTGAT
TTAATAAAAG GATTGGGTGG TAATAATGAA TAA
|
|---|
| Protein sequence | MHIPDGFLPI WEAGLLWLVS LVCIGLSLKW ASKEMNEKTV PLFAAVAAGI FAIQAMNIPI
PWGTSGHMGG AALASIIFDS PWAGVLMLAL VLIVQGLFFA DGGILAMGAN VFNMGIISAF
VGYYVFKSLK KVNIAVAAFG AGWFALFLGA IVCAIEMAVA GTFPLDKGLQ FMGLYHAAIG
FIEGGITAVV IQYISSVRPD LIKGLGGNNE
|
|---|
| |