Gene Maeo_0045 details

Gene Information

• Locus tag: Maeo_0045
• ID: 5326236
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: +
• Start bp: 50244
• End bp: 52058
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640787439
• Product: carbamoyl-phosphate synthase L chain ATP-binding
• Protein accession: YP_001324249
• Protein GI: 150400483
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.308823
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGAAA CAGAAAAACT AAAAGAAATA ATATTTAATG CCAAAAAAAT GGGTTTTTCA 
GATGCCCAGT TATCTAATTT ATTGAATAAA AGCGAATCAG AGATAAAAAA CCTTAGAAAA 
GAATTAAATG TAATGCCTGT TTTTAAAATG GTGGATACCT GCGCAGCAGA ATTTGAGGCA 
AAAACTCCAT ATTATTATTC TTGCTACGAA AATTTATTTT ATGATGAACA AAATGAAAGC 
ATACCAACAA AAAGAAAAAA GGTAATAATA TTGGGTTCTG GACCTATCAG AATTGGACAA 
GGTGTAGAAT TTGATTATTC CACCGTTCAT GCCATATATG CTTTAAAAGA TATGGGTATT 
GAAGCAATAA TTGTAAATAA CAATCCTGAA ACTGTATCCA CTGATTACGA TACCTCCGAT 
AAATTATATT TTGAGCCATT AACCTATGAG GAAATTATGA ATATCGTTGA AAATGAAAAT 
AAAAATGGCG ATTTATTGGG AGTAATAGTT CAATTTGGAG GGCAGACTGC AATAAACCTT 
GCTATGAGAT TATATGATTC TGGTGTAAAT ATATTGGGAA CTTCTCCAAA ATCTATTGAT 
TTAGCTGAGG ATAGGGAGCA ATTTTCAGAG ATATTAAATA AAATAGGTAT TCCACAGGCT 
GAGGGTGCTA CTGTATATAA TGAAAAAGAT GCACTTGTTG TAGCTAAAAA AATTGGATAT 
CCTGTTCTTG TTCGACCTTC CTATGTTTTG GGGGGTAGGG CTATGGAAAT TGTATATAAT 
GAAGAGGAAT TAAAGAACTA CATGAAAGAA GCCGTAAAAG TATCATCTGA ACATCCCATA 
TTAATCGATA AGTTTTTAGA TGAGGCTACG GAGGTTGATG TAGATGCTAT TTGCGATGGG 
GACGATGTAT TTATTGGGGG AATTATGGAG CATATCGAGG AAGCTGGAAT TCACAGTGGA 
GATAGTGCCT GTGTAATACC ATCTCAAACT TTATCTCCAC AAGTAATAGA TACCATTATT 
GACCATACCA CCAATCTTGC AAAGGAATTG GGTGTAATTG GACTGTTGAA TATACAGTAT 
GCCGTTAAAG ATGGTGTAGT TTATATTATT GAAGCAAATC CACGGGCAAG TAGGACCATA 
CCATATGTAA GTAAATCTGT GGGAGCTCCC CTTGCCAAAA TTGCTACAAA GGTAATCATG 
GGGCAAAAAT TAAAAGATAT GGGATATATT GGATTAGCTC AATCAAAATA TGTGAGCATT 
AAAGAAGCCG TATTCCCATT CCAAAAGCTA ACCGGAGTAG ACCCAGTGCT TAGTCCAGAA 
ATGAAATCCA CAGGAGAGGC TATTGGAATA GATACAGATT TTGGTAGGGC ATTTTATAAA 
GCTCAACTGT CTGCCAACAT GGAGCTCCCA ATGTCTGGAA CTGTGTTCAT AAGTGTTAAG 
AAAAAGGATA GAAAACATTT AGAAAAAATG GCAAAAGAAT TTAATAAATT TGGATTTAAT 
ATTATTGCAA CAGATGGAAC AGCTGAGGAA ATTAGAAGTA ATGGAGTAGA TGCTACAATA 
GTCAAAAAAA TATCCGAAGG TATAAAAGGT AGCATATTGG AAGAAATACA AAAAGGAAAT 
GTTGATTTAA TCATAAATAC CTCTTCTGGA AGTAGGGCAA AATCTGATGG ATACTACATA 
AGACGAGCCG CCGTTGAATT TAATATACCA TATATTACAA CAATACAGGG AGCACTATCC 
ACTATAAAGG CAATAAAATC TGTTAAAGAA GGAGATTTGG GGGTTTATTC TTTAAATGAC 
CTTGAAAATA AATAA 

 

Protein sequence

MMETEKLKEI IFNAKKMGFS DAQLSNLLNK SESEIKNLRK ELNVMPVFKM VDTCAAEFEA 
KTPYYYSCYE NLFYDEQNES IPTKRKKVII LGSGPIRIGQ GVEFDYSTVH AIYALKDMGI 
EAIIVNNNPE TVSTDYDTSD KLYFEPLTYE EIMNIVENEN KNGDLLGVIV QFGGQTAINL 
AMRLYDSGVN ILGTSPKSID LAEDREQFSE ILNKIGIPQA EGATVYNEKD ALVVAKKIGY 
PVLVRPSYVL GGRAMEIVYN EEELKNYMKE AVKVSSEHPI LIDKFLDEAT EVDVDAICDG 
DDVFIGGIME HIEEAGIHSG DSACVIPSQT LSPQVIDTII DHTTNLAKEL GVIGLLNIQY 
AVKDGVVYII EANPRASRTI PYVSKSVGAP LAKIATKVIM GQKLKDMGYI GLAQSKYVSI 
KEAVFPFQKL TGVDPVLSPE MKSTGEAIGI DTDFGRAFYK AQLSANMELP MSGTVFISVK 
KKDRKHLEKM AKEFNKFGFN IIATDGTAEE IRSNGVDATI VKKISEGIKG SILEEIQKGN 
VDLIINTSSG SRAKSDGYYI RRAAVEFNIP YITTIQGALS TIKAIKSVKE GDLGVYSLND 
LENK