Gene Maeo_0040 details

Gene Information

• Locus tag: Maeo_0040
• Symbol: cbiD
• ID: 5327512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: +
• Start bp: 44144
• End bp: 45280
• Gene Length: 1137 bp
• Protein Length: 378 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640787434
• Product: cobalt-precorrin-6A synthase
• Protein accession: YP_001324244
• Protein GI: 150400478
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1903] Cobalamin biosynthesis protein CbiD
• TIGRFAM ID: [TIGR00312] cobalamin biosynthesis protein CbiD

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATATG ATTTCTTGAA AGAAAAAAAA TTTGGATATA CAACAGGTTC TTGTGTTGTA 
GCCGGTGCAT ACTGTGGAAT ATATTATTTA AAACATAGTG TAAAATTAAA TATCGTAGAA 
TTGGAAAATT CAAAAAATGA TAAATTAATA ATTCCCATTG AAGATGTAAA ACTGGGTAAA 
ATTGCAACCA TCAAAAACAT CAATAACACT GGCAAAATAA AGCCAAACAG GGCAACTACA 
ATAGTTAAAA AGTTTTCAGG AGAAGACATT GACATCACAA ATGGCATTGA TATTGTAGTG 
GATGTGGAAT TATTAAAAAT GGAAAAAGAT AAACCAAAAA TAGAAATAGT AGGTGGAAAT 
GGTGTAGGAA TAGTTACAAA AGATGGATTA CAGATAAAAA AAGGAGAATA TGCTATAAAT 
CCAAAACCGC GAGAAATGAT TAAAAATAAT ATTATAAATT TGCTTGATGA CGATGAAAGG 
GCAATAATAA AAATAACAAT TCCAAAAGGG GAGGAATTAG CTAAAAAAAC ATTAAATCCA 
AAATTGGGAA TAATTGGGGG GATTTCCATA TTGGGGACTA CTGGAATAGT TAGACCCATG 
TCAAATGAAG CATATAAAGA ATCACTTGCA CCACAAATTG ATGTAGCTCT TGCAAATAAT 
TATAAAAAAT TAATATTCAC ACCGGGAAAT ATTGGCACAA AGTACGCAAA AATAAAATAT 
GGTGTAGATG ATGACAATAT TGTTGAAGTA TCAAATTTTT GGAGTTTTAT GCTCGATAAA 
GCTGTGGAAA AAGGAGTTAA AGATATATTG ATATTTGGAC ATTCTGGAAA AATTATAAAA 
CTTGCAGGAG GCATATATGA TACCCATTCA AAAGTTGCAG ATGCTAGAAA TGAAATATTG 
ACGGCATATA GTTCTCCGTT TATTAATGAT AAGCAGATTT TAAAAAATAT ATTATACAGC 
AATACTACCG AAGAAATAGT TAAAATACTT GAAAAAGAAA ATATATTGCA TGAGGTATTT 
AATTTAATTG CTGAGCGAGT AGTTGAGCGA GTAAGTAGTA GATGGGAAGG TATAAAATTC 
TCCTGTGTTA TAATTGATAT GAAAGGTGAT ATATTGGGAA GCCATATTTA TAGTTAA 

 

Protein sequence

MIYDFLKEKK FGYTTGSCVV AGAYCGIYYL KHSVKLNIVE LENSKNDKLI IPIEDVKLGK 
IATIKNINNT GKIKPNRATT IVKKFSGEDI DITNGIDIVV DVELLKMEKD KPKIEIVGGN 
GVGIVTKDGL QIKKGEYAIN PKPREMIKNN IINLLDDDER AIIKITIPKG EELAKKTLNP 
KLGIIGGISI LGTTGIVRPM SNEAYKESLA PQIDVALANN YKKLIFTPGN IGTKYAKIKY 
GVDDDNIVEV SNFWSFMLDK AVEKGVKDIL IFGHSGKIIK LAGGIYDTHS KVADARNEIL 
TAYSSPFIND KQILKNILYS NTTEEIVKIL EKENILHEVF NLIAERVVER VSSRWEGIKF 
SCVIIDMKGD ILGSHIYS