| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0001 |
|---|
| Symbol | |
|---|
| ID | 5327703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 196 |
|---|
| End bp | 1440 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 640787396 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001324206 |
|---|
| Protein GI | 150400440 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1822] Predicted archaeal membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000175712 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAA CATTTAAAGA AATATTGGCT AAAAAAAATA TAAAATATGA TAATCCCGTA
ATTGTTATTT TATTAGGTTA TTTGGCAATA TTTGTCCTTG CCATACCTTA TTATTATAAG
TTTAATTTAT TTTCTCTATT AAATATATTT TTAGTTATTT TTTTACTTAT TCTTTCCTTT
GCCCTGCCAT TTTTGTTAAA TGTGGATATA GAGGGAAATA ATAAAATCTC TAATTTTTAT
AGACTTTACG GGTTATTATT ATTTATTATT ATATTTTATG GCGTATTTGT TGTTATGAAT
TCCATTTTAT TTGCCGTTTT ATGCTCACTG TTTGTTATTG GAATATCAAA TTTATATGTT
AAATATAAAC TATACGATAA CGGACAGGAT ATAAAAAATA AACAACATGA AAAATATTGT
AAATTCAAGG AATTGCTATT TAAAAATATG GATAATATAA TATTTGCCAT TGGAATTATG
TCATTTATGG CGTTGGTGAT TATTCATAAT GCTATACCGT TGTTTAATTA TCCTGTTAGG
ATGAGTTTAT CTGCGGACCC ACTTAGATTA ATATCTACGG GAGCTCTGGT ATATGGAGGT
ATTAATAATA TATTTTATTT TATAATTGCC TTTATTTTAC TAATATTATT GGGCTATAAA
ATGGGCGTAT TAATCGTTTT TATAGCTTTT TTAGTATATA GATATCAAAC AAAAAAAATA
AAAATAAAAT ATATATTGTT GTCAATCATA GGATTAATTG GATTATTGGC TTTAATGTCA
AAAGCAATAC TATATACATC AAATCAAAAT TGGAATATTG GTGTATTTGG CATATTATCA
TATAGGGCCT ATTTTGATAT AATGGTGCTG GAAAAAATAA TAAATTATCC ATATATGTTG
CTGGGGGCAA TCTCTTTAAA TCCTATTGGG GAAGGACTTA TTGCAACCAC TTTATTGGGG
TATTCAAATC CACATAATAT TACTTCAACA ATGTTTGGAC CCATATTATT GGATTTCGGA
TTATGGGGAG GATTATTATT TGCATTTTTA TTGGGTCTAG CAAGTAAATT AATATATGGG
GGAGATAGAA AACTATATGC AATATATGCA TCAATATTAT TATCTATGTG TGAAGTTGGT
ATTAATTATG GTTTTTTAAT TATTGTGTTT GTAATGTTAT ATGTGAATTC TAAATTATCG
ATACTAAAAA ATAAAAATAG AAATAAAAAT AAAAATAGAA CATAA
|
|---|
| Protein sequence | MISTFKEILA KKNIKYDNPV IVILLGYLAI FVLAIPYYYK FNLFSLLNIF LVIFLLILSF
ALPFLLNVDI EGNNKISNFY RLYGLLLFII IFYGVFVVMN SILFAVLCSL FVIGISNLYV
KYKLYDNGQD IKNKQHEKYC KFKELLFKNM DNIIFAIGIM SFMALVIIHN AIPLFNYPVR
MSLSADPLRL ISTGALVYGG INNIFYFIIA FILLILLGYK MGVLIVFIAF LVYRYQTKKI
KIKYILLSII GLIGLLALMS KAILYTSNQN WNIGVFGILS YRAYFDIMVL EKIINYPYML
LGAISLNPIG EGLIATTLLG YSNPHNITST MFGPILLDFG LWGGLLFAFL LGLASKLIYG
GDRKLYAIYA SILLSMCEVG INYGFLIIVF VMLYVNSKLS ILKNKNRNKN KNRT
|
|---|
| |