Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_1623 |
Symbol | |
ID | 5326201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | - |
Start bp | 1639230 |
End bp | 1640351 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640787316 |
Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
Protein accession | YP_001324127 |
Protein GI | 150400360 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000208392 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGAAT TAAAAAGCAT TAAAAAAATT GATGACTTTT ATTTTACAAG AAAAAAAGAG CTAATTTTTG AAAAGAAAGG CGGAAAAAAA ATTTTTGGTA AATTTTGTGT TTTTGTTCCA ACCGAAATTA TTGAAGCGTC GGGAGGAATT TCAGTTGGAC TTTGTGGTGG AAAAGAGTCT ACGATAGCTA CTGCAGAAGA AGACTTACCA AGAAACATCT GTCCACTAAT CAAGTCTTCT TACGGGTTTA TAAAAGAAAA AAATTGCCCT TACTTTGAAT TAGCAGACGT TATTGTCGGC GAAACCACGT GTGATGGGAA GAAAAAAATG TTTGAGCACT TAATGGAACT TTCAAATTTG TATATTATAC ACCTTCCCCA TTTTAAAGAT GAACGATCAT ACGAACTATG GTTAAAAGAA GTACATGATT TTAAAGAATA TGTTGAAAAA ATAACTGGAA ATAAGATTAC AGATGAAAAA TTAAAAGAAG TAATTGACAG GGAAAACGAA GAAAGAAAAT TATATTACCG AGTTTATGAA TTAAGGAAAA ATATACCTAC ACCAATAAAT GGAATGGATT CATTAAAATT ATTCCAAAAG TTATCCCTAC TTAAAATACA AGATCGAATT AAACTATTAA AAGAACTAAT ATTGGAACTC GAAAAAAGAG TTGAGAATAA TTACGGATAT TACGGGAAAA GAATTATGAT TTCAGGGTGC CCGATGGTTT TTGGAAATAC TAAAATCGTT GATTTAATTG AAGAAGTTGG CGGAATTGTT GTTGGCGAAG AAACATGTAC TGGAACAAGA AAATTTGAAA ATTTGGTTAA TGGGTACAGT ATTGAAGACC TTGCAAAAAG GTATTTTAAA ATATCTTGTG CTTCAGGATT TAACAATAAA ATCAGGATGG AAAGAATTAA AGAACTTGTA AATGAACAAA ATGCTGACGG CGTTATATAC TATACACTAC AATACTGCCA TACATTTAAT ATCGAAGGCG TTTTAATTGA AAAAGAACTA AAAAAAGAAG GCATTCCAAT TATTAGGATA GAAACCGATT ATTCTGAGAA TGACATTGAA CAGTTACGAA CTAGGCTTGA GGCCTTTTTA GAAATGATTT AA
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Protein sequence | MDELKSIKKI DDFYFTRKKE LIFEKKGGKK IFGKFCVFVP TEIIEASGGI SVGLCGGKES TIATAEEDLP RNICPLIKSS YGFIKEKNCP YFELADVIVG ETTCDGKKKM FEHLMELSNL YIIHLPHFKD ERSYELWLKE VHDFKEYVEK ITGNKITDEK LKEVIDRENE ERKLYYRVYE LRKNIPTPIN GMDSLKLFQK LSLLKIQDRI KLLKELILEL EKRVENNYGY YGKRIMISGC PMVFGNTKIV DLIEEVGGIV VGEETCTGTR KFENLVNGYS IEDLAKRYFK ISCASGFNNK IRMERIKELV NEQNADGVIY YTLQYCHTFN IEGVLIEKEL KKEGIPIIRI ETDYSENDIE QLRTRLEAFL EMI
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