| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1572 |
|---|
| Symbol | |
|---|
| ID | 5325539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 1584865 |
|---|
| End bp | 1586772 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640787264 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001324076 |
|---|
| Protein GI | 150400309 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
|---|
| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.342192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCAGCGG AAGATATATT AAACGAGATA AAGGCTGAAG TTATACGCAA AGCCCCAGGA
AATGCGGTAA TTACGGATGT CGAATTTGAA GGTTCAGAAG TAGTAATTTA TGCAAAAAAT
CCAGAACTTT TTTCAAACAG TATTATAAAA GAATTTGCAA GGGATTTTAG AAAAAGGCTT
GCAATAAGGC CTGATCCTTC TGTTTTAGTC GAACCTGAAG TCGCAAAAGA GCAGATTTTA
AAGATAGTTC CTGAAGATGC TGAAGTTACA AACTGCGTGT TTGATGCAAA TACTGGCGAA
GTAATTATCG AATCAAAAAA ACCGGGACTT GTAATTGGAA AAGAAGGCTC AACCCTTGAA
GATATTAAAA AAGCAATTCA ATGGGCCCCA AAACCAGTTA GGACTCCACC AATTCCATCA
GATACTATTA AAGCCATTAG GGCTACAATG TATCGTGAAA GAACGGATGT AAAAGATATT
TTAAGGAGAA TTGGAAGAAG AATACATAGG GATGTACGAT TGAGAGACGA TTCATGGATT
AGAACTTCTT TTTTAGGCGG GAGTAGGGAA GTTGGAAGAA CATGTATCTA CCACCAAACT
CCGGAAAGTA GAATTTTAGT GGATTGCGGT ATTAACATTG CAGTAGATGA CGAAAAAGCT
TTTCCACATT TTGATGCGCC GGAATTTTCA ATTGATGAAA TCGATGCTGT TGTTGTAACT
CATGCCCACC TTGACCATTG TGGATTTATT CCAGGATTAT TTAGGTATGG CTATGATGGG
CCAGTATATT GTACAAAACC AACTAGAGAT TTGATGACCC TTCTACAAAA AGACTACGTT
GAAATTAGCG AAAAAGAAGG AAAGAATGTT CCATATTCCT CAAAAGATAT TAAAAACGCA
ATAAAGCATA CAATACCTCT TGATTATGGC GTTACCACAG ATATTGCACC TGCAATTAAA
TTAACATTAC ATAATGCAGG GCATATCTTG GGTTCCGCAA TTTCACACTG TCACGTTGGA
GATGGACTCT ATAACGTTGC ATACACAGGA GATATTAAAT TTGAAGCTTC AAGATTATTA
GAACCTGCAA CATGCCAATT CCCAAGACTT GAAACACTCA TTATTGAATC CACGTATGGG
GGGTACGATG ACGTACTTCC AGAAAGAGAT GAAACTGAAA AAGAGTTCTT AAATGTAATG
TTGGAGACCA CCTCTAGGGG CGGAAAAGTA ATCATTCCCG TATTTGGTAT TGGAAGAGCC
CAAGAACTAA TGCTTGTTTT AGAAGAAGGA TATAATCAAG GTATATTCAA TGCTCCAGTT
TACCTTGATG GTATGATATG GGAAGCTACT GCAATTCACA CCGCTTATCC AGAATATTTA
TCTAAAGCGA TGAGAAACAG GATATTCCAT GAAGGAGATA ATCCATTCCT TTCAGAAGTA
TTCAAAAAAG TTAAGAATAC AAACGACAGG AGAAACATCA TGGATGGAGA TGAAGCTTGT
ATCATTCTTA CAACTTCAGG CATGCTTAGT GGTGGCCCGA GTGTTGAATA CTTTAAGAAT
CTTGCAGAAG ATGAAAAGAA CGCAATCGTG TTTGTAGGGT ATCAATCTGA AGGAACATTG
GGTAGAAAAA TCCAGAGAGG ATTTAAAGAG ATTCCCCTAA TGGGTAAGAA CGGAAGGAGT
AAAGCTGTAA AGGTAAACCT TTCAGTTCAT ACCTTAGAAG GGTTTTCAGG GCATAGTGAT
AGAAAGCAGT TGATAAAATA CTTAAGAAAG TTAAAACCAA TTCCAGACCG TATATTAACG
GTTCACGGTG AAGCTTCAAA GTGTATTGAT CTTGCAAGTA CTGCATATAA ACTCTTTAAA
AAAGAAACCC GTTCACCAAT GAATCTTGAT TCTATAAGGC TTAGGTAA
|
|---|
| Protein sequence | MSAEDILNEI KAEVIRKAPG NAVITDVEFE GSEVVIYAKN PELFSNSIIK EFARDFRKRL
AIRPDPSVLV EPEVAKEQIL KIVPEDAEVT NCVFDANTGE VIIESKKPGL VIGKEGSTLE
DIKKAIQWAP KPVRTPPIPS DTIKAIRATM YRERTDVKDI LRRIGRRIHR DVRLRDDSWI
RTSFLGGSRE VGRTCIYHQT PESRILVDCG INIAVDDEKA FPHFDAPEFS IDEIDAVVVT
HAHLDHCGFI PGLFRYGYDG PVYCTKPTRD LMTLLQKDYV EISEKEGKNV PYSSKDIKNA
IKHTIPLDYG VTTDIAPAIK LTLHNAGHIL GSAISHCHVG DGLYNVAYTG DIKFEASRLL
EPATCQFPRL ETLIIESTYG GYDDVLPERD ETEKEFLNVM LETTSRGGKV IIPVFGIGRA
QELMLVLEEG YNQGIFNAPV YLDGMIWEAT AIHTAYPEYL SKAMRNRIFH EGDNPFLSEV
FKKVKNTNDR RNIMDGDEAC IILTTSGMLS GGPSVEYFKN LAEDEKNAIV FVGYQSEGTL
GRKIQRGFKE IPLMGKNGRS KAVKVNLSVH TLEGFSGHSD RKQLIKYLRK LKPIPDRILT
VHGEASKCID LASTAYKLFK KETRSPMNLD SIRLR
|
|---|
| |