| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1264 |
|---|
| Symbol | |
|---|
| ID | 5325241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 1291094 |
|---|
| End bp | 1291873 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640786956 |
|---|
| Product | proteasome subunit alpha |
|---|
| Protein accession | YP_001323773 |
|---|
| Protein GI | 150400006 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
|---|
| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAA TGGTTCCAGC ATCAGGATAC GATAGGGCAA TAACCATATT CAGCCCAGAA
GGACGACTTT ACCAGGTAGA ATATGCACGA GAAGCCGTAA GGCGAGGAAC TACTGCGGTA
GGCATTAAAT GTAAAGACGG TGTTGTTTTA GCCGTTGACA GAAGAATTAC AAGTAAATTA
ATTGATGTTT CATCAATTGA AAAGATATTT CAAATTGACG ACCATATTGT AGCTGCTACA
TCAGGTCTGG TTGCTGATGC AAGAGTTTTA ATTGATAGGG CAAGGGTTGA AGCTCAAGTA
AATAGAATAT CATATGGCGA AGCGATTACT GTCGAAGCAC TTGCAAAAAA AATCTGCGAT
ATTAAACAAG CGTATACTCA CCACGGAGGT GCAAGGCCTT TTGGTTTGGC ACTTTTGATA
ACCGGAATTG ATAGACACAG TGCAAGGCTC TTTGAAACTG ACCCTAGTGG AGCTTTAATT
GAATACAAAG CTACTGCAAT CGGTTCAGGA CGGCCTGTTG CAATGGAAAT TCTTGAAGAA
AAATACGACG AAAATATGAG CGTTAGTGAA GGTATGGAAC TTGCAATTTA CGCTTTAAGT
AAAACTACTG AAGAATTAAA GCCTGAAAAT ATAGACATGG CAATTGTAAA AGATACCGGA
AAATTGGTCG AAAAAATAAC TGTTTTTGAA ATTGAAAAAA TTGTAAAAAA AGTATATGAT
AAAATAAAAG TAGAAAACGA AGAGGCTGAA AAAAAGAAGG CTACTGAAAA TATAGAATAG
|
|---|
| Protein sequence | MQQMVPASGY DRAITIFSPE GRLYQVEYAR EAVRRGTTAV GIKCKDGVVL AVDRRITSKL
IDVSSIEKIF QIDDHIVAAT SGLVADARVL IDRARVEAQV NRISYGEAIT VEALAKKICD
IKQAYTHHGG ARPFGLALLI TGIDRHSARL FETDPSGALI EYKATAIGSG RPVAMEILEE
KYDENMSVSE GMELAIYALS KTTEELKPEN IDMAIVKDTG KLVEKITVFE IEKIVKKVYD
KIKVENEEAE KKKATENIE
|
|---|
| |