| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0951 |
|---|
| Symbol | |
|---|
| ID | 5325963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 966420 |
|---|
| End bp | 966899 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640786621 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001323466 |
|---|
| Protein GI | 150399699 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGTG AACTCTGCGG GAAAGAGGTT AAGGATATCT TTAAAACAAG GATAGAAGGA
GTAGATATGA ATGTTTGCGA AACTTGTGCA AAGTTTGGAA TTACTCCAAA AGGATATTCT
AGAATGCCAA AGGCAGTATT CAATGTCACT TCGGACAAAA AAGAAAAAAC TTCAAAGAAG
CCTAAAAAAG ACATGTTTGA TAGCTTAAAA ACGATTGTCG AGGACTACGG CACATTAATA
AGGGAAGCAA GGGAAAAAAG AAATATGACG CTAGAAGGCC TTGCAAGAAC AGCCGGCATT
AAAGAATCAC TCCTTCACAA AATCGAAAGA AATGAAATTG AACCGGAAGA AAAATACGTT
AATATTCTTG AAAGAGAGCT TAAAATATCA CTTTACGAAG AAGGAACTTA TAATTACGAA
TCAAAAGATG AAAATGCTGA TTTTACACTT GGGGACTTTG TAAAAATCAA AAAAAGGTAA
|
|---|
| Protein sequence | MQCELCGKEV KDIFKTRIEG VDMNVCETCA KFGITPKGYS RMPKAVFNVT SDKKEKTSKK
PKKDMFDSLK TIVEDYGTLI REAREKRNMT LEGLARTAGI KESLLHKIER NEIEPEEKYV
NILERELKIS LYEEGTYNYE SKDENADFTL GDFVKIKKR
|
|---|
| |