Gene Mevan_0911 details

Gene Information

• Locus tag: Mevan_0911
• ID: 5326130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus vannielii SB
• Kingdom: Archaea
• Replicon accession: NC_009634
• Strand: +
• Start bp: 930834
• End bp: 931499
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640786583
• Product: TrkA domain-containing protein
• Protein accession: YP_001323428
• Protein GI: 150399661
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.347676
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATATTA TAATTGCAGG AATAGGCAGA GTAGGAATTT CTCTTGCAAA ATCGCTTTCA 
GGTAAGGGTC ACGACCTTGT GCTTTTAGAT GAAAATAAAA AAACTTGTGA AGAAGTTGCA 
AGTGAAATAG ATGCACTTGT AATAAATGGC GACTGTACAA AAATTAAATC ACTTGAAAAT 
GCAGGAATTG AAGATGCAGA TATGTTTATT GCAGTTACTG GAAATCAAGA AATAAATCTA 
ATCAGTAGCC TTATTGCAAA AAAATCTAAC GTTTCAAAAA CAATTGCACG TGTTAGCGAG 
CCAGACTATA AAGAAGTATT CGAAAGCCTT GGAGTTGGCG TAGTAATAAG TCCGGAACTT 
GTTGCAGCAA ACTATATCGA AAAATTAATT GAACGGCCCG GTGTAGTAGA CCTTGCAATA 
GTTGGAAGGG GGGATGCAGA AATTTTAGAA CTAATAATTC CACCAAATTC AAAAGTTGCG 
AACAAAAAAA TTCGTGAACT TAAAAACACC AAAGATTATG TCATAATTGC AATTTATGAA 
GGAAACGAGT TAAAAATTCC AGATGGAAGT ACTGAATTAA AAGAATACGA TAGAATTATC 
ATTCTTGCAA AAACACCTGC TTTAGAGGAG GTTAGAAAAG TATTTTCAAA TGAGTCAAAT 
GAATAA 

 

Protein sequence

MYIIIAGIGR VGISLAKSLS GKGHDLVLLD ENKKTCEEVA SEIDALVING DCTKIKSLEN 
AGIEDADMFI AVTGNQEINL ISSLIAKKSN VSKTIARVSE PDYKEVFESL GVGVVISPEL 
VAANYIEKLI ERPGVVDLAI VGRGDAEILE LIIPPNSKVA NKKIRELKNT KDYVIIAIYE 
GNELKIPDGS TELKEYDRII ILAKTPALEE VRKVFSNESN E