Gene Mevan_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_0896 
Symbol 
ID5326157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand
Start bp916987 
End bp917826 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content35% 
IMG OID640786568 
Productspermidine synthase 
Protein accessionYP_001323413 
Protein GI150399646 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID[TIGR00417] spermidine synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCG ATGCATGGTA TACTGAACCT CAAACTGAAA ATTTAAGCCT TTCAACTAAG 
TTAAAAAATA TTTTATACGT TGGACAGTCA AAATATCAAG AAATCCAAAT TCTTGATACT
TACGAGTTTG GTAAAGTATT GATTTTAGAA AACACGTACC AAACTACCGA AAGGGACGAA
TTTATATATC ACGAACTTAT TTCACACCCT GCACTATTCA CGCATGAAAA CCCTAAAAAA
GTTCTCGTAA TTGGCGGAGG GGATGGCGGA ACAGTAAGGG AAGTAGTAAA ACATGAAAGC
GTTGAAAAAA TTGATTTCGT TGAACTTGAT GGAATGGTTG TAGAAGTTTC TAAACAATTC
TTACCTTCAT TAAGCTGTGA AATCGATAAC CCGAAAGTAA ACACGATTAT TACGGATGGA
ATAGAATATG TTGCTAAAAC CAAGGAAAAA TACGATGTAA TTTTGGTAGA CTGCCCAGAT
CCAGTTGGTC CAGCTGCAGG ATTATTTGAA AAAGAGTTTT ACAACAACCT ATTTAAATGT
CTAAATGACG ACGGAATTAT GGTTCAGCAG ACTGAAAGCC CACTCTTGCA TGAAACTTTA
ATAAATAAAA TTAAAGGGCA CTTAAAAGAC GCCGGTTTTC CAGTTATAAG GCCTCTTGTA
TGCAGTATTC CCACATACCC AAGTGGATTT TGGAGTTTTA CACTTGCTTC AAAGAAAAAC
GACCCATTAA CATCAGATGT TAATGAAATT CAAGACAAAT TGAAGAATAT GCCTACAAAG
TACTACGATC AAGATGTGCA TAAAGGCGTA TTTTTAGCGA CTCCTAGATA CTTAAAATAA
 
Protein sequence
MKFDAWYTEP QTENLSLSTK LKNILYVGQS KYQEIQILDT YEFGKVLILE NTYQTTERDE 
FIYHELISHP ALFTHENPKK VLVIGGGDGG TVREVVKHES VEKIDFVELD GMVVEVSKQF
LPSLSCEIDN PKVNTIITDG IEYVAKTKEK YDVILVDCPD PVGPAAGLFE KEFYNNLFKC
LNDDGIMVQQ TESPLLHETL INKIKGHLKD AGFPVIRPLV CSIPTYPSGF WSFTLASKKN
DPLTSDVNEI QDKLKNMPTK YYDQDVHKGV FLATPRYLK