Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0896 |
Symbol | |
ID | 5326157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | + |
Start bp | 916987 |
End bp | 917826 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640786568 |
Product | spermidine synthase |
Protein accession | YP_001323413 |
Protein GI | 150399646 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCG ATGCATGGTA TACTGAACCT CAAACTGAAA ATTTAAGCCT TTCAACTAAG TTAAAAAATA TTTTATACGT TGGACAGTCA AAATATCAAG AAATCCAAAT TCTTGATACT TACGAGTTTG GTAAAGTATT GATTTTAGAA AACACGTACC AAACTACCGA AAGGGACGAA TTTATATATC ACGAACTTAT TTCACACCCT GCACTATTCA CGCATGAAAA CCCTAAAAAA GTTCTCGTAA TTGGCGGAGG GGATGGCGGA ACAGTAAGGG AAGTAGTAAA ACATGAAAGC GTTGAAAAAA TTGATTTCGT TGAACTTGAT GGAATGGTTG TAGAAGTTTC TAAACAATTC TTACCTTCAT TAAGCTGTGA AATCGATAAC CCGAAAGTAA ACACGATTAT TACGGATGGA ATAGAATATG TTGCTAAAAC CAAGGAAAAA TACGATGTAA TTTTGGTAGA CTGCCCAGAT CCAGTTGGTC CAGCTGCAGG ATTATTTGAA AAAGAGTTTT ACAACAACCT ATTTAAATGT CTAAATGACG ACGGAATTAT GGTTCAGCAG ACTGAAAGCC CACTCTTGCA TGAAACTTTA ATAAATAAAA TTAAAGGGCA CTTAAAAGAC GCCGGTTTTC CAGTTATAAG GCCTCTTGTA TGCAGTATTC CCACATACCC AAGTGGATTT TGGAGTTTTA CACTTGCTTC AAAGAAAAAC GACCCATTAA CATCAGATGT TAATGAAATT CAAGACAAAT TGAAGAATAT GCCTACAAAG TACTACGATC AAGATGTGCA TAAAGGCGTA TTTTTAGCGA CTCCTAGATA CTTAAAATAA
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Protein sequence | MKFDAWYTEP QTENLSLSTK LKNILYVGQS KYQEIQILDT YEFGKVLILE NTYQTTERDE FIYHELISHP ALFTHENPKK VLVIGGGDGG TVREVVKHES VEKIDFVELD GMVVEVSKQF LPSLSCEIDN PKVNTIITDG IEYVAKTKEK YDVILVDCPD PVGPAAGLFE KEFYNNLFKC LNDDGIMVQQ TESPLLHETL INKIKGHLKD AGFPVIRPLV CSIPTYPSGF WSFTLASKKN DPLTSDVNEI QDKLKNMPTK YYDQDVHKGV FLATPRYLK
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