| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0872 |
|---|
| Symbol | |
|---|
| ID | 5326171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 896141 |
|---|
| End bp | 897802 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640786544 |
|---|
| Product | coenzyme-B sulfoethylthiotransferase |
|---|
| Protein accession | YP_001323389 |
|---|
| Protein GI | 150399622 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4058] Methyl coenzyme M reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03256] methyl-coenzyme M reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCTG AAAAAAGATT ATTCTTGAAA GCATTAAAGG AAAAATTCGA AGAAGATCCA
AAGGAAAAAT ACACAAAATT CTATACCTAC GGCGGTTGGG AACAATCTGC TAGGAAAAGA
GAATTTGTTG CAGCTAACGA AAAAGTTTTA GCTGAAAAAA GACAGGGAGT TCCACTTTAC
AACCCTGATA TTGGTGTTCC TTTAGGACAG AGAAAGTTAA TGCCTTACAA ATTGTCAGGA
ACTGACTCAT ACTGTGAAGG TGACGACTTA CACTTCATGA ACAACGCTGC TATCCAACAG
TTATGGGACG ATATCAGAAG AACAGTTGTT GTAGGTATGG ACACTGCTCA CTCAGTTTTA
GAAAAAAGAT TGGGTGTAGA AGTAACTCCT GAAACAATCA ACGAATACAT GCACACAATT
AACCACGCAC TTTCAGGTGG TGCAGTTGTT CAAGAACACA TGGTTGAAGT TCACCCTTCC
CTTGCATGGG ATTCATACGC TAGAATCTTC ACTGGTGACG ATGAATTAGC TGCGGAATTA
GACAGTAGAT TCTTAATTGA CATTAACAAA TTGTTCCCAG CAGAACAAGC TGAAGCTTTG
AAAAAAGCTA TCGGTAAAAA AACATACCAA GTATCAAGGG TACCATCACT CGTAGGTAGA
GTATGTGACG GCGGTACAAT CTCAAGATGG TCTGCAATGC AGATTGGAAT GTCATTCATT
ACCGCATACA AACTTTGTGC AGGAGAAGCT GCAACAGCTG ACTTCTCATA TGCTTCAAAA
CACGCTGACG TAATTCAGAT GGGTAACGCT TTACCTGGAA GAAGAGCAAG AGGTCCAAAC
GAGCCAGGGG GAATCCAGTT CGGTATCCTT TCAGACGTTG TACAAACTAC AAGAGTTTCA
GACGACCCAG TTGAGCAGTC ATTAGAAGTA GTAGCAGCTG GTGCTGCATT ATATGACCAA
ATATGGCTTG GTGCATACAT GTCTGGTGGC GTAGGTTTCA CACAATACGC TACAGCAGCA
TACACCGACG ATATCTTGGA CGATTTCTCA TACTATGCAC TTGACTACGT AGAGAAAAAA
TACGGTAGAA TGGGAACTAA AGCTACAATG GACGTAGTAG AAGACATTGC AAGTGAAGTT
ACACTCTACT CATTAGAACA GTACGATGAA TACCCCGCAT TATTAGAAGA CCACTTTGGT
GGATCACAGA GAGCTGCAGT TGCTGCTGCT GCATCCGGTA TCGGTGTATG TATGGCAACA
GGTAACTCAA ACGCTGGTGT AAACGGCTGG TACTTATCAC AAATATTACA CAAAGAATAC
CACAGTAGAC TTGGATTCTA TGGTTACGAC TTGCAGGACC AATGTGGTGC TTCAAACTCA
CTCGCAATCA GAAACGACGA ATCTGCACCT CTTGAATTAA GGGGGCCTAA CTACCCTAAC
TACGCAATGA ACGTAGGTCA CCAGGGAGAA TACGCAGGTA TTGCACAAGC TGCTCACTCA
GCAAGAGGAG ATGCATTTGC AATGAGTGCA TTAATTAAAG TTGCATTCGC TGACCCAATG
CTTGTATTTG ACTTTTCAAA ACCAAGAAAA GAATTTGCAA GAGGAGCATT AAGAGAATTC
GACGCTGCAG GAGAAAGAGA CGTTATCTTA CCTGCAAAAT AA
|
|---|
| Protein sequence | MEAEKRLFLK ALKEKFEEDP KEKYTKFYTY GGWEQSARKR EFVAANEKVL AEKRQGVPLY
NPDIGVPLGQ RKLMPYKLSG TDSYCEGDDL HFMNNAAIQQ LWDDIRRTVV VGMDTAHSVL
EKRLGVEVTP ETINEYMHTI NHALSGGAVV QEHMVEVHPS LAWDSYARIF TGDDELAAEL
DSRFLIDINK LFPAEQAEAL KKAIGKKTYQ VSRVPSLVGR VCDGGTISRW SAMQIGMSFI
TAYKLCAGEA ATADFSYASK HADVIQMGNA LPGRRARGPN EPGGIQFGIL SDVVQTTRVS
DDPVEQSLEV VAAGAALYDQ IWLGAYMSGG VGFTQYATAA YTDDILDDFS YYALDYVEKK
YGRMGTKATM DVVEDIASEV TLYSLEQYDE YPALLEDHFG GSQRAAVAAA ASGIGVCMAT
GNSNAGVNGW YLSQILHKEY HSRLGFYGYD LQDQCGASNS LAIRNDESAP LELRGPNYPN
YAMNVGHQGE YAGIAQAAHS ARGDAFAMSA LIKVAFADPM LVFDFSKPRK EFARGALREF
DAAGERDVIL PAK
|
|---|
| |