| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0836 |
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| Symbol | secD |
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| ID | 5325049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 865485 |
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| End bp | 866651 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640786506 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001323354 |
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| Protein GI | 150399587 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC TAAAAGATCC TAAAGTTGCA ATTCTTTTAG TGTTTGTTCT AGCCTCCGTA
CTTCTTCTTA CATTCAAAGG ACTTTCCTTT GGTGTAGATT TAAGTGGTGG CTCAACAATA
GTATTAAACA CTGAAAAACC ATTAAGTGAC GCTGAAATGG TTTCAGTAAC TGAAATTTTG
ACAAGCAGGC TAAATACCAA TGGATTAAGT GATGTTAGAA TTTACCCCCG GGGTAGTGAT
GAAATAGTAA TTGAAATACC AAAAAGTGCT GATTTAGAGC GAATTGAACG AATTTTAACT
CAGCAAGGGG TATTTATAGC AACAATTGAT AATAAAACTG CATATGTTGG ACAGGATATA
TCCTACGTTG AAGAACCAAG AATGACTGCA TCAGGATATG GTGTAGGATT TAGATTATCC
TCAGATGGCG CAAATAACTT TGCAGAAGTT GCATACGGAA AAGGGGGGTA TCCTGTAGAA
CTATACATGG ATGGAAATCT TGTAAGTGCT CCGATACTTT CTCCCGACCT TGCAGATGGT
AGGCCCCATC AAAGTCAGGT AATTACCGTA GCAGGGGCTA GCCCAACAAG AGAGGATATT
GAAAAGGCAT GGGTAATATA TACTGCTTTG AAATCTGGTT CGCTTCCAGT AAAAGTTGAA
ATAGCATATA TAAGTTCTGT TTCACCAACA TTGGGTGCAG AATTTATAAA AGGGGCATTA
ATTGCAGGAT TATTCGCATT CCTTGCAGTT GCAACAGTTA TTTCATTTAG ATACAAAAAC
CCGAAAATCG TGCTACCGAT ATTAATAACA GGATTTTCAG AAGTCCTTCT CATACTGGGT
TTTGCATCAC TTATTGATTG GAAACTTGAT TTGGCATCAA TTGCAGGGAT TGTTGCAGCA
GTAGGTACTG GTGTAGATCA CCAAATTGTA ATTACTGACG AAACAATTGC TGGAGAATCA
AAAAAAGTTA CAAAAAATAT TAAAAGAGCT TTCTTTATTA TATTTGGTGC AGCCGCTACA
ACCATTGCAG CAATGCTTCC TTTATTTGTA ATGGGTATCG GAATGCTCAA AGGATTTGCG
ATAACAACAA TTGCAGGTGT TTTAATGGGT ATATTAATAT CAAGACCTGC ATTTGCTAGA
ATAATGCAAT ATGTACTAAA ACACTAA
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| Protein sequence | MKLLKDPKVA ILLVFVLASV LLLTFKGLSF GVDLSGGSTI VLNTEKPLSD AEMVSVTEIL
TSRLNTNGLS DVRIYPRGSD EIVIEIPKSA DLERIERILT QQGVFIATID NKTAYVGQDI
SYVEEPRMTA SGYGVGFRLS SDGANNFAEV AYGKGGYPVE LYMDGNLVSA PILSPDLADG
RPHQSQVITV AGASPTREDI EKAWVIYTAL KSGSLPVKVE IAYISSVSPT LGAEFIKGAL
IAGLFAFLAV ATVISFRYKN PKIVLPILIT GFSEVLLILG FASLIDWKLD LASIAGIVAA
VGTGVDHQIV ITDETIAGES KKVTKNIKRA FFIIFGAAAT TIAAMLPLFV MGIGMLKGFA
ITTIAGVLMG ILISRPAFAR IMQYVLKH
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