| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0795 |
|---|
| Symbol | |
|---|
| ID | 5324677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 825876 |
|---|
| End bp | 826685 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640786464 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001323313 |
|---|
| Protein GI | 150399546 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAGA CATTATCTTT AATGGGGTAC TCACTAAGTT TTGAAATAAT GACTTTAGTT
AAATTTTTTT TAATACTTAT TTTTGGGTAC ATTTCAGTTA GGACAATAAA AACAGTTTTA
AAAAGAGGCG TAAAAAAGAG TAAAATTCCA GAATTGGTTT CTGAATTTGT AATTCATCTT
ATTAGCTCTT TATTGTACGT TCTGGTACTT TTACTTGCAG TAGGGGTTTT TGGAATAGAA
ACGGGGCCCA TAATACTTGG GTTATCTGCT TCAATCGGAC TTATTTTGGG TTTTGGATTT
CAGGATACTC TTACAAATCT TACCTCTGGA ATATGGATTG CCGTAATGAG GCCCCTTGAT
AAGGATGAAG TAGTTCAGGT TGGCGGAATA ACTGGAAAAG TTGTTGAATT AGGTATAATG
GCAACAAAAC TTTTAACGCC AGATAATGTA GTAATTACAA TACCAAATAA GCTTGTTTGG
GGAAGTCCAA TAACAAACTA TACTAGAATG GATTTAAGAA GAGTAGATGT GGCAGTTGGA
GTTAGCTACA GTGGAAGTGT CCAAGATGCA ATTTCCTCTG CAATGGAACT TATTTTAAGC
CATAATTTGG TTTTGAAAGA CCCTACTCCG GCAGTAATTG TTACTGAACT TGGAAATTCT
TCAGTTAATT TACAGCTTAG GGCTTGGACT AAAACAGAGG ATTATTGGAA ACTTAAAAGT
GAATTGACAA GAGGAATATA TGAAAAGTAT AAAAAAGAAG GAATAGAAAT ACCATTTCCG
CAGATGGATG TGCATATTCA TAAATACTAA
|
|---|
| Protein sequence | MIQTLSLMGY SLSFEIMTLV KFFLILIFGY ISVRTIKTVL KRGVKKSKIP ELVSEFVIHL
ISSLLYVLVL LLAVGVFGIE TGPIILGLSA SIGLILGFGF QDTLTNLTSG IWIAVMRPLD
KDEVVQVGGI TGKVVELGIM ATKLLTPDNV VITIPNKLVW GSPITNYTRM DLRRVDVAVG
VSYSGSVQDA ISSAMELILS HNLVLKDPTP AVIVTELGNS SVNLQLRAWT KTEDYWKLKS
ELTRGIYEKY KKEGIEIPFP QMDVHIHKY
|
|---|
| |