| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0790 |
|---|
| Symbol | |
|---|
| ID | 5324678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 822665 |
|---|
| End bp | 823342 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640786459 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_001323308 |
|---|
| Protein GI | 150399541 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACATTA TGGAAGGTTT TTTACCGCCG ATGTGGGCTG CAATTTGGTT TTTAATTTCT
GGAATTGTTG TAATTTATGG AATAATTCAG CTAAATAAAT TAATTAGCGA AAAACCAGAA
ATTAAACCCA CACTTGCACT TGCAGGAGCA TTTATGTTTG TGTTAAGTTC ATTAAAACTT
CCATCGGTTA CTGGAAGTTG TTCGCACCCA ACAGGTAGCG GGCTTGGTGC AGTTATGTTT
GGACCGGCAA TTACTGCGGT TTTGGCAACT ATTGTACTTT TATTTCAGGC AGTACTTCTT
GCACACGGAG GTTTGACCAC TCTTGGTGCA AACATATTTT CAATGGGTAT AATGGGCCCC
CTTATTGGAT ATATCGTGTT TAAATTGTTA AAAGGAAAAA TAAACATTAC ATGGGCAGTT
GTGCTTGCTG CAATATTTGC AAACTGGGGG ACGTATGTTG TAACATCAAT ACAGCTAGCT
TTGGCATACC CGATACCTGA CTTTGGAACT GCGCTTTCAA ATTTTGGAAC AGTATTTGCA
ATTACACAAA TTCCACTTGC AATAATGGAA GGTTTATTAA CTGGACTTAT ATGGGATTAT
ATCATGAAAC TAAGGCCTGA CCTCCTTTCC AAACTTGGAA TTATTGATGG TAAGTTAAAT
AATGGAGGTG CCCAATAA
|
|---|
| Protein sequence | MHIMEGFLPP MWAAIWFLIS GIVVIYGIIQ LNKLISEKPE IKPTLALAGA FMFVLSSLKL
PSVTGSCSHP TGSGLGAVMF GPAITAVLAT IVLLFQAVLL AHGGLTTLGA NIFSMGIMGP
LIGYIVFKLL KGKINITWAV VLAAIFANWG TYVVTSIQLA LAYPIPDFGT ALSNFGTVFA
ITQIPLAIME GLLTGLIWDY IMKLRPDLLS KLGIIDGKLN NGGAQ
|
|---|
| |