Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0672 |
Symbol | |
ID | 5325059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | + |
Start bp | 721027 |
End bp | 722862 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640786340 |
Product | DNA-directed RNA polymerase subunit B' |
Protein accession | YP_001323190 |
Protein GI | 150399423 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAAAC AGGCAAACGT TTACGTCAAT GGGAAATTGA TAGATACTTC AAAAGACCCT GAAAACCTCG TTAAATCATT AAGGATACAG AGAAGAAGCG GAAAATTATC TCCAAACACA TCTATTTCAT TTAATGAAGA AAGTAACGAT ATTCATATAT CAACCGATGG CGGTAGGGCT GTAAGGCCGC TAGTGGTAGT TGAAAACGGG TTTTCAAAAT TAACAAACGA ACTTTTAGAA AAAGTTAATA ATAATGAACT TACTTTTGAA TACCTTGTAA AAACGGGCGT TATTGAGTTT TTAGATGCTG AAGAAGAAGA AAACGCAAGA ATTGCAATGT ACAATGACGA AATTACTTTT GAAAATACGC ATGTTGAAAT TGACCCACTT GTAATTTTAG GTATCGGTGC AGGTGTTGCA CCTTATCCTG AACATAACTC AGCCCCAAGG ATTACGATGG CTGCTGCAAT GGGTAAACAA TCATTAGGAA TTCCAATGGC GAATATAAAG TGGAGAATGG ATACAAGGGG ACATCTACTT CACTACCCTC AAGTTCCATT GGTTAGAACA AAACACCAGG AAATATTAGG ATTTGATAAA AGGCCTGCGG GACAAAATTT CGTTGTAGCA GTTATGAGTT ACGAAGGATA CAACATGGAA GATGCATTCG TAATTAATAA AGCATCTCTT GAAAGGGGCC TTGGAAGGAG TACATTTTTT AGAAGTTATG AAAGCTTTGA AAAAAGATAC CCTGGTGGAC AACTTGATAA ATTCGAAGTT CCTGAAAAGG GCGTTAGGGG ATATAGGGCT GAAGAAGCAT ACCGAAATTT GGGAGATGAT GGTTTAATAG ACTTAGAATC TGAAGTAAGG TCTGGAGATG TAATATTGGG AAAAACTTCA CCTCCAAGGT TTTTAGAAGA ACAAGAAATA ACCCTTCAAA CAAAATCACA GAGAAGAGAC ACATCCGTTA CAATTAGACA CGGTGAAGAA GGAGTAGTTG ACCTCGTAAT TTTAAGTGAA ACTAAGGAAG GAAATAGACT TGGAAAAGTT AGAGTTAGAG ATTTAAGAGT TCCCGAATTT GGAGATAAAT TTGCTTCAAG ACACGGACAA AAAGGAGTTA TAGGGCTCGT TGTACCCCAG GAAGATTTAC CATTTACCGA AGATGGAGTA ATTCCTGATT TAATTATTAA CCCACACGCA ATTCCCTCAA GAATGACTAT TGGACAGGTT CTTGAAATGA TTGGCGGTAA AGTTGGTTCA TTAGAATGTA GACGAGTTGA CGGAACTATA TTCAGTGGTG AAGGAGAATG GGCTCTAAGA CATGCTCTTG AAAACTACGG GTTTACACAT AGTGGTAAAG AAACTATGTA TGATGGAAAA ACAGGCCGAA AATTAGAATG TGAAATATTT GTTGGAGTTG CATATTACCA AAAACTACAC CACCTTGTTG CAGGGAAAAT CCACGCAAGA AGTAGGGGCC CAATTCAAGT CCTTACACGG CAACCTACTG AAGGTAGAGC TAGGGAAGGA GGTCTCAGGT TTGGAGAAAT GGAGAGAGAC GTTCTTGTTG CCCACGGTGC TGCACTACTA CTTAAAGAAA GATTACTCGA TGAATCAGAC CCGCATGAAG ATTATGTATG TGCAAAGTGT GGTGAAATCG CAATCTTTGA TTACAAAAGA GGCATGAAAT TCTGTCCAGT ATGTGGCGAA TCAGAAGACA TTCAGGATAA TAGAAAAATT CCGCCTGTAA AAATTGCTTA TGCATTCAAA TTACTATTGG ATGAACTTAA GAGTATGGGA ATCGATCCAA AATTAAAATT AAAAGATAGA GCATAA
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Protein sequence | MEKQANVYVN GKLIDTSKDP ENLVKSLRIQ RRSGKLSPNT SISFNEESND IHISTDGGRA VRPLVVVENG FSKLTNELLE KVNNNELTFE YLVKTGVIEF LDAEEEENAR IAMYNDEITF ENTHVEIDPL VILGIGAGVA PYPEHNSAPR ITMAAAMGKQ SLGIPMANIK WRMDTRGHLL HYPQVPLVRT KHQEILGFDK RPAGQNFVVA VMSYEGYNME DAFVINKASL ERGLGRSTFF RSYESFEKRY PGGQLDKFEV PEKGVRGYRA EEAYRNLGDD GLIDLESEVR SGDVILGKTS PPRFLEEQEI TLQTKSQRRD TSVTIRHGEE GVVDLVILSE TKEGNRLGKV RVRDLRVPEF GDKFASRHGQ KGVIGLVVPQ EDLPFTEDGV IPDLIINPHA IPSRMTIGQV LEMIGGKVGS LECRRVDGTI FSGEGEWALR HALENYGFTH SGKETMYDGK TGRKLECEIF VGVAYYQKLH HLVAGKIHAR SRGPIQVLTR QPTEGRAREG GLRFGEMERD VLVAHGAALL LKERLLDESD PHEDYVCAKC GEIAIFDYKR GMKFCPVCGE SEDIQDNRKI PPVKIAYAFK LLLDELKSMG IDPKLKLKDR A
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