| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0485 |
|---|
| Symbol | |
|---|
| ID | 5325532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 531702 |
|---|
| End bp | 533876 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640786148 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001323004 |
|---|
| Protein GI | 150399237 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.265664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTA AACTAAAAGT TTCGGGAATG ACATGTGCCG TTTGTGCAAA CACAATTGAA
AGGTCAGTAT CTAAAATGGA AGGAATATCT AAAATTAGTG TAAACCTTCT TGAAGAGAGC
GTTAGCATTA TTTTTGACGA TAAAGTTTTA AGTATTGCCG ACATTACTTT AAAAATTGAA
AAATTAGGAT ATAATGTACT TGGAAACTTT GAAGAAGTAG TTGATGATGA AAAAAAACGT
GAAATGGACT TAAAAGAAAA ATTTAATCGG ACAATTTTTG GTTCCTTGTT TTCAATTGTA
CTATTCTCTT TGATGTATAT CTCAATTCCG TATAAAATAT ACGTTGCATT TTTAATTTCG
CTACCTCCTT TATTTTACGT TGCAATGCCA ATTTTTAAAT CAGGCTACAA TTCTTTTTTA
AACAAAACAT TGAACATGGA TGTAATGTAT TCTCTTGGAA TGGGGGTTTC TTACCTCTCT
GCAATTTTAG TAACCCTAAA ACTACTTCCA ATGAACTTCA TGTTTTACGA TACTACAATA
ATGCTTGCAA CCCTTTTAAC CCTTGGAAGA TATTTAGAAG AGCGTGCAAA AGGAAAAACC
TCAAAAGCCA TTAAAAAATT AATAAAGCTT CAAGTAAAAA CTGCAAAAGT TATTAGGGAT
GAAATTGAAG TAGAAATACC AATAGAAGAA GTTATAGTTG GAGACCTTGT AGTTATACGT
CCAGGAGAGA AAATTCCTGT TGATGGACGT GTTTTTGAAG GTTTTTCATA TGTTGATGAA
TCCATGATTA CTGGTGAACC GGTACCAAAT TCAAAAAGTA TTGGAAATAC GGTGATATCT
GGGACAATCA ACAAAAACGG AGTTTTAAAA GTAACTACTG AAAAAATTGG AAAAGATACA
TTGTTATCCC AAATAATCCA ACTTGTTAAA AATGCCCAAA GTTCAAAGCC AAAAATTCAA
AATCTAGCAG ATAAAGTCGT TTCATACTTT ATTCCAGTTG TATTTATAAT TGCAATTGCA
TCTGCAAGTT ACTGGTATTT TGTAGATAGT ATACTTCTTT CAGTAACTAC TTTTATATCC
GTAATGGTAA TTGCATGCCC TTGTGCCCTT GGACTTGCAA CTCCAACTGC AATTACTGTT
GGTATTGGAA GGGGGGCAGA ATTAGGAATT TTAATTAAAG ATAGTAAGGT TTTTGATGTA
TCTGAAAACT TAAAATGCAT GATTTTTGAC AAAACTGGAA CGATTACAAA AGGAAAACCT
GAAGTAGATG AAATAGTTTC TAAAATGCCG GTAAATGACC TATTAATGAT TGCAGGGTCG
ATGGAAAAGG ATTCTGAACA TCCAATTGGT CGAGCAATTG TTAAACGAGC TCAGGAATTA
AATATTTCAT TTAAAAATCC AAAGGAATTT GAAGTAATTT CTGGAATGGG CTTAAAGGGA
ACAGTTGATG AAAAAACTGT CGTAATTGGG AATCCAAGCT TAATTGAATT AAATGATATT
AAAATTGATG AATATTATTT AAAAAACATT TCTAGATTAC AAGAAAACGC AAAAACTGTC
GTAGTTTTAG CAATTGATAA CCGCGTAGAA GGATTAATTG CAATATCAGA TCAAATAAAA
GAAAACGCAA GAAACACAAT TGATGAACTT AGAGAATTAG GTATTGAATC TTACATGATA
ACAGGCGATA ATGAAAAAAC TGCAAAAGTA ATTGGTAAAA GCGTTGGAAT TTCGGAAAAA
AATATATATT CTGATGTTCT TCCCGAAAAG AAAGCTGAAA TCGTTAAAAA AATAAAAGAA
AGCGTTGAAG GATACGTTGA ATTTATTGGT GATGGTATAA ATGATGCACC GGCACTTTCA
ACAGCTGATG TTGGAATAGC AGTTGGCAGT GGAACAGATA TCGCAATTGA AAGCGGTGAC
GTTGTTTTAA TGAAAGATGA CTTAAAATAC GTTACAGGAT TTGTAAAACT AAGTAAGAGA
GTGTTAAAAC AGATTAAATT AAACTTGTTT TGGGCTTTTG CATATAACTC TATATTAATA
CCTGTTGCAG CAGGTGCACT TTATTCTTAC AACATAAAAT TTCAACCCGA ACTTGCAGCT
ATTGCAATGA CTTTAAGTTC CCTTACAATT ATTGGATTAT CCCTTCTCCT AAGAAGATAT
AACCCGATAA AATAA
|
|---|
| Protein sequence | METKLKVSGM TCAVCANTIE RSVSKMEGIS KISVNLLEES VSIIFDDKVL SIADITLKIE
KLGYNVLGNF EEVVDDEKKR EMDLKEKFNR TIFGSLFSIV LFSLMYISIP YKIYVAFLIS
LPPLFYVAMP IFKSGYNSFL NKTLNMDVMY SLGMGVSYLS AILVTLKLLP MNFMFYDTTI
MLATLLTLGR YLEERAKGKT SKAIKKLIKL QVKTAKVIRD EIEVEIPIEE VIVGDLVVIR
PGEKIPVDGR VFEGFSYVDE SMITGEPVPN SKSIGNTVIS GTINKNGVLK VTTEKIGKDT
LLSQIIQLVK NAQSSKPKIQ NLADKVVSYF IPVVFIIAIA SASYWYFVDS ILLSVTTFIS
VMVIACPCAL GLATPTAITV GIGRGAELGI LIKDSKVFDV SENLKCMIFD KTGTITKGKP
EVDEIVSKMP VNDLLMIAGS MEKDSEHPIG RAIVKRAQEL NISFKNPKEF EVISGMGLKG
TVDEKTVVIG NPSLIELNDI KIDEYYLKNI SRLQENAKTV VVLAIDNRVE GLIAISDQIK
ENARNTIDEL RELGIESYMI TGDNEKTAKV IGKSVGISEK NIYSDVLPEK KAEIVKKIKE
SVEGYVEFIG DGINDAPALS TADVGIAVGS GTDIAIESGD VVLMKDDLKY VTGFVKLSKR
VLKQIKLNLF WAFAYNSILI PVAAGALYSY NIKFQPELAA IAMTLSSLTI IGLSLLLRRY
NPIK
|
|---|
| |