Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0410 |
Symbol | |
ID | 5325612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | - |
Start bp | 462664 |
End bp | 464100 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640786074 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_001322930 |
Protein GI | 150399163 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.13343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAATG AAAAAGCCAT AATCATTGGT GCAGGGGGCG CTGGAAAAGA ACTTTTGAAT GAATTTATAG CTGGTTCATA TCCAATAAAT ATTTTGGGAT TTATAGATGA TAACGTAACT GAATCAATAA AAAGTTTCCC AATCCTCGGT AAAATTGAAA ATTTAAAACA AATTATACCA AAATATGGTA TAAAAATAGT TTTTATTGCA ATGCCTGCTA CTGAAGGTGA ATTACTTAAA AAAATTTATC TTGAATGTAT TAAGTTTCCA GTTAAAATTA AATTAATACC AAGATATTCT GAAATATTAT TAAATAGGGT TAATCTAACC CAATTAAGGG AAATTTCTGT TGAAGACATT ATTGGAAAAA AGGTTACAAA AAAAATGTTT GAAAATATCT CAAAAAAGGT TGAGGGTAAA ACATTTATTG TCTTTGGTGC TGCTGGATCT ATTGGCTCAA AATTATGTCA ACAAATTGCA AGTTTATGCC CTAAAAAATT AATCATGGTC GACTGGTCAG AAAATGGAAT GTTTTATCTA GAAGACAAGA TAAATAAAAT TATTAAGACA AATGATAAGG TTTCATTAAA TAATTTTTCA TACTATATTG GAAATATTCA AGATGAAGTC CGCATGAATC AAATAATTGG TAGTGAAAAA CCAGACGTAA TTATTAATGC TGCAGCATAT AAACACGTTC CACTAATGGA ATTAAATTAC TATGAAGCTA TCAAAAATAA TGTAATGGGT TCAAAAAATT TATATGAAAT TGCAATCAAA CACCAAGTAA AAAATTTTAT ATTAATATCT TCAGATAAGG CTGTAAATCC GACAAATATT ATGGGCGTTA CAAAAAGAAT AACTGAAAAA ATGATGCATT ACTATGCATC ACTAGACAAT TCAAAAACTT CCTTTTTAGC CGTTAGATTT GGAAATGTAA TAAATAGTAA TGGAAGTGTT ATACCTACAT TTCAAAAACA AATTAGGGAA GGCCGTATAA CAATAACTCA TAAAGATATT ATTCGGTATT TCATGAGTAT AGATGAAGCT GTTTATTTGA TATTACAGTG TTGGGTTCAA GGAACTAATG ATGAAATATT TGTTTTAGAT ATGGGGGAAC CAATTAAGAT TATTGACCTT GCAACACTAA TGATAAAAAT TGCAGGTTTG GAATTAGATA AAGATGTTAA ATTAGAATTT ATCGGATTAA GACCTGGGGA AAAACTATAT GAAGAACCGT TAACAAAAAT TGAAGAAACG TTGGCAACAA AAAACGACAA AATTTATATT TTAAAAAGAG ATGAAGAATT TGACCATAAA GAATTTATCG ATACAGTAAC CCAATTAGTT AACGTTAGTG GGGAAAAAAC ATTTGATGAA GTAAAACCGA TATTGAAAAA ATTAGTGCCT ACTTATAAAG AATTCGATAT GGTGTAA
|
Protein sequence | MDNEKAIIIG AGGAGKELLN EFIAGSYPIN ILGFIDDNVT ESIKSFPILG KIENLKQIIP KYGIKIVFIA MPATEGELLK KIYLECIKFP VKIKLIPRYS EILLNRVNLT QLREISVEDI IGKKVTKKMF ENISKKVEGK TFIVFGAAGS IGSKLCQQIA SLCPKKLIMV DWSENGMFYL EDKINKIIKT NDKVSLNNFS YYIGNIQDEV RMNQIIGSEK PDVIINAAAY KHVPLMELNY YEAIKNNVMG SKNLYEIAIK HQVKNFILIS SDKAVNPTNI MGVTKRITEK MMHYYASLDN SKTSFLAVRF GNVINSNGSV IPTFQKQIRE GRITITHKDI IRYFMSIDEA VYLILQCWVQ GTNDEIFVLD MGEPIKIIDL ATLMIKIAGL ELDKDVKLEF IGLRPGEKLY EEPLTKIEET LATKNDKIYI LKRDEEFDHK EFIDTVTQLV NVSGEKTFDE VKPILKKLVP TYKEFDMV
|
| |