Gene Mevan_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_0293 
Symbol 
ID5325495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand
Start bp343983 
End bp345704 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content29% 
IMG OID640785957 
ProductDNA ligase I, ATP-dependent Dnl1 
Protein accessionYP_001322814 
Protein GI150399047 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID[TIGR00574] DNA ligase I, ATP-dependent (dnl1) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.33298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTTA ATGAATTTTG TAAAATAATT GAAAAAATTG AAAATACTCC AAAAAGACTT 
GAAAAAATAG ATTATTTTGT TGAAATAATT GATTTTGTTA AAAATCATGG AAAACCTGAA
AATTTAAAAG AGATTTGTCA GGTATCCATT GGAAGAGTAT TTGCAGAATA TGAAAATAGG
GAGATAGGAA TAGGCCCAAA CTTACTTATT GAAGCCATTA AAACAACGGG AATTTCTGAA
AATGATTTAA ATTTAAAGAT AAAAGAAACT GGTGACATTG GAATTTCAGT TGAACATTTA
AGTTCAAAAA TAAAGCAAAT TTCATTGTTT AATGAACCTT TGACCTTTGA AGAAGTTTAT
TCTACAATAA AAAAGTTATC AACTATTGAA GGAACTTCTT CACAAAAGAA AAAGATTAGA
ATAATTTCAA ATCTCCTGAT TATAGCAAAT CCTATCGAAT CAAGATACAT TTCAAGATTA
ATTTTGGAAG ATATGCGAAT TGGGATGAAT ATTCCAACGA TTTTAGCAGC GTTTTCAAAT
TATTTTGGGA TTGAAAAGGA AAAAATAGAA AAAGTATATG CTGTTACAAA TGATATAGGG
CTCATTGGTA AAAAGTTACT TGAAAATTCA AATTTTGAAG AAGATCCTGA ACTAAATCTT
ACTGTTTTTA GGCCAATAAA GCCCATGCTT GCACAATTAA CGCCTTCAAT TGAAGAAGCA
GTTATTGAAA TGAAAAATCC TCAATTTGAA ACTAAATACG ATGGAGCAAG AGTTCAAGTA
CATAAATCAA ATGGTGAAGT AAAAATATAC AGTCGAAGGC TTGAAGACAT TACAAATTCC
GTTCCAGAAC TAGTTTTAGA GATTAAAAAC TTAGAAGTAG ATAATGTAAT TTTAGAGGGG
GAATGTGTTG CCATGAACCT TGAAAACGGT AAGCCAAGGC CTTTTCAAGA TATTTTAAGA
CGTTTTAGGA GGAAATATGA CATTGATAAA ATGACTGAAG AAGTAAGTTT GAGAATATAT
TTTTTCGACA TTTTATACCA CAATAAAGGA TTAATTGATT TACCTTTGTT TGAAAGAAGA
AATATTTTGG AAAACATTTT TGGAACTAAT AATTGGGATT TGGAACTTAA AAAAATAGAA
AATGAAATAA AATCTAACAA AATGCTTTTT ACATCGTTTA AAGTAAGCAG CACTGACCTA
AAAATTGCAA AGGAATTTTT TAAATGGAGC TTAAGTATTG GACATGAAGG AATCATGGTG
AAAAATTTAA ATGCAATTTA TACTCCTGGA AGTCGTGTAA AAACAATGTG TAAGATTAAA
CAGACTTTAG AAAACCTTGA TGTTGTTGTA ACTCGTGCAA AAATAGGAAT GGGTAAAAGA
AAGGACTGGT ATGGGTCGTA TGAAATTTCA GTTAAGGGTG ACGACGAAAG CTTACACGTT
ATTGGGAATG TTGGAAGCGG ACTTACCGAA GAAGATTTAG AAAAACTTAC AAAAATCGCT
AATGAAATAA AAATAGAGGA TTTAGGTGGA GAAGTTATAC TTGAACCAAA AATAGTTCTA
GAGGTAACTT ATGAAGAAAT TCAAACTTCA GAAAAATATG AAATGGGCTA TGCACTTAGA
TTTCCAAGGG TTGTTGGAAT AAGAGAAGAC AAATCTATAA ATGACATTAA CTCATTAGAT
GATGTGAAGA AAATATACGA AATAGAACGA AAAAGAAAAT AG
 
Protein sequence
MLFNEFCKII EKIENTPKRL EKIDYFVEII DFVKNHGKPE NLKEICQVSI GRVFAEYENR 
EIGIGPNLLI EAIKTTGISE NDLNLKIKET GDIGISVEHL SSKIKQISLF NEPLTFEEVY
STIKKLSTIE GTSSQKKKIR IISNLLIIAN PIESRYISRL ILEDMRIGMN IPTILAAFSN
YFGIEKEKIE KVYAVTNDIG LIGKKLLENS NFEEDPELNL TVFRPIKPML AQLTPSIEEA
VIEMKNPQFE TKYDGARVQV HKSNGEVKIY SRRLEDITNS VPELVLEIKN LEVDNVILEG
ECVAMNLENG KPRPFQDILR RFRRKYDIDK MTEEVSLRIY FFDILYHNKG LIDLPLFERR
NILENIFGTN NWDLELKKIE NEIKSNKMLF TSFKVSSTDL KIAKEFFKWS LSIGHEGIMV
KNLNAIYTPG SRVKTMCKIK QTLENLDVVV TRAKIGMGKR KDWYGSYEIS VKGDDESLHV
IGNVGSGLTE EDLEKLTKIA NEIKIEDLGG EVILEPKIVL EVTYEEIQTS EKYEMGYALR
FPRVVGIRED KSINDINSLD DVKKIYEIER KRK