Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0293 |
Symbol | |
ID | 5325495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | + |
Start bp | 343983 |
End bp | 345704 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640785957 |
Product | DNA ligase I, ATP-dependent Dnl1 |
Protein accession | YP_001322814 |
Protein GI | 150399047 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.33298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTTA ATGAATTTTG TAAAATAATT GAAAAAATTG AAAATACTCC AAAAAGACTT GAAAAAATAG ATTATTTTGT TGAAATAATT GATTTTGTTA AAAATCATGG AAAACCTGAA AATTTAAAAG AGATTTGTCA GGTATCCATT GGAAGAGTAT TTGCAGAATA TGAAAATAGG GAGATAGGAA TAGGCCCAAA CTTACTTATT GAAGCCATTA AAACAACGGG AATTTCTGAA AATGATTTAA ATTTAAAGAT AAAAGAAACT GGTGACATTG GAATTTCAGT TGAACATTTA AGTTCAAAAA TAAAGCAAAT TTCATTGTTT AATGAACCTT TGACCTTTGA AGAAGTTTAT TCTACAATAA AAAAGTTATC AACTATTGAA GGAACTTCTT CACAAAAGAA AAAGATTAGA ATAATTTCAA ATCTCCTGAT TATAGCAAAT CCTATCGAAT CAAGATACAT TTCAAGATTA ATTTTGGAAG ATATGCGAAT TGGGATGAAT ATTCCAACGA TTTTAGCAGC GTTTTCAAAT TATTTTGGGA TTGAAAAGGA AAAAATAGAA AAAGTATATG CTGTTACAAA TGATATAGGG CTCATTGGTA AAAAGTTACT TGAAAATTCA AATTTTGAAG AAGATCCTGA ACTAAATCTT ACTGTTTTTA GGCCAATAAA GCCCATGCTT GCACAATTAA CGCCTTCAAT TGAAGAAGCA GTTATTGAAA TGAAAAATCC TCAATTTGAA ACTAAATACG ATGGAGCAAG AGTTCAAGTA CATAAATCAA ATGGTGAAGT AAAAATATAC AGTCGAAGGC TTGAAGACAT TACAAATTCC GTTCCAGAAC TAGTTTTAGA GATTAAAAAC TTAGAAGTAG ATAATGTAAT TTTAGAGGGG GAATGTGTTG CCATGAACCT TGAAAACGGT AAGCCAAGGC CTTTTCAAGA TATTTTAAGA CGTTTTAGGA GGAAATATGA CATTGATAAA ATGACTGAAG AAGTAAGTTT GAGAATATAT TTTTTCGACA TTTTATACCA CAATAAAGGA TTAATTGATT TACCTTTGTT TGAAAGAAGA AATATTTTGG AAAACATTTT TGGAACTAAT AATTGGGATT TGGAACTTAA AAAAATAGAA AATGAAATAA AATCTAACAA AATGCTTTTT ACATCGTTTA AAGTAAGCAG CACTGACCTA AAAATTGCAA AGGAATTTTT TAAATGGAGC TTAAGTATTG GACATGAAGG AATCATGGTG AAAAATTTAA ATGCAATTTA TACTCCTGGA AGTCGTGTAA AAACAATGTG TAAGATTAAA CAGACTTTAG AAAACCTTGA TGTTGTTGTA ACTCGTGCAA AAATAGGAAT GGGTAAAAGA AAGGACTGGT ATGGGTCGTA TGAAATTTCA GTTAAGGGTG ACGACGAAAG CTTACACGTT ATTGGGAATG TTGGAAGCGG ACTTACCGAA GAAGATTTAG AAAAACTTAC AAAAATCGCT AATGAAATAA AAATAGAGGA TTTAGGTGGA GAAGTTATAC TTGAACCAAA AATAGTTCTA GAGGTAACTT ATGAAGAAAT TCAAACTTCA GAAAAATATG AAATGGGCTA TGCACTTAGA TTTCCAAGGG TTGTTGGAAT AAGAGAAGAC AAATCTATAA ATGACATTAA CTCATTAGAT GATGTGAAGA AAATATACGA AATAGAACGA AAAAGAAAAT AG
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Protein sequence | MLFNEFCKII EKIENTPKRL EKIDYFVEII DFVKNHGKPE NLKEICQVSI GRVFAEYENR EIGIGPNLLI EAIKTTGISE NDLNLKIKET GDIGISVEHL SSKIKQISLF NEPLTFEEVY STIKKLSTIE GTSSQKKKIR IISNLLIIAN PIESRYISRL ILEDMRIGMN IPTILAAFSN YFGIEKEKIE KVYAVTNDIG LIGKKLLENS NFEEDPELNL TVFRPIKPML AQLTPSIEEA VIEMKNPQFE TKYDGARVQV HKSNGEVKIY SRRLEDITNS VPELVLEIKN LEVDNVILEG ECVAMNLENG KPRPFQDILR RFRRKYDIDK MTEEVSLRIY FFDILYHNKG LIDLPLFERR NILENIFGTN NWDLELKKIE NEIKSNKMLF TSFKVSSTDL KIAKEFFKWS LSIGHEGIMV KNLNAIYTPG SRVKTMCKIK QTLENLDVVV TRAKIGMGKR KDWYGSYEIS VKGDDESLHV IGNVGSGLTE EDLEKLTKIA NEIKIEDLGG EVILEPKIVL EVTYEEIQTS EKYEMGYALR FPRVVGIRED KSINDINSLD DVKKIYEIER KRK
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