Gene Mevan_0287 details

Gene Information

• Locus tag: Mevan_0287
• ID: 5326181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus vannielii SB
• Kingdom: Archaea
• Replicon accession: NC_009634
• Strand: -
• Start bp: 338545
• End bp: 339198
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640785951
• Product: TPR repeat-containing protein
• Protein accession: YP_001322808
• Protein GI: 150399041
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3063] Tfp pilus assembly protein PilF

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.37702
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAATCA AACAATATAT TTTATTATTA ATATTAACTA CGTCCTTGAT TTTAACTTCA 
GGATGTCTAG ATGAAATTAT TAATAAAGAC AGTCCAGACT CGTTAAACAA AGTAGGGCTT 
GAGTATTACA ACAGTTTTGA CTATCAAACA GCGATTACTT ATTTTGATAA AGCAATTGAA 
GTTGACTCTA AATTTAAAGA ATCATGGTAT AATAAGGGAA ATTCACTAAA TGCACTTCAA 
AGGTATGATG AAGCAATTTT CTGTTTTGAT AAGGCACTTG AATTAGATCC AAATAATCAC 
TACTATTTAA GTTCTAAGGG GTATTCATTA AATAGTTTGC AGAGGTATGA TGAAGCAATT 
TTCTGCTACA GTAAAGCATT AGACTCTGAA CCAAATAACT CTTACTATCT AAGTGGTAAA 
GGATATGCAT TATACTATGG CAGAAATAAA GAGGAAGCAG TTACTTATTT TGATAAAGCA 
ATTGAGTCTG ATCCTAATTA TGCATATGCG TGGTATTTTA AAGGTAATAT ATATTATGAA 
AGTGGAGAAT ATCAAACAGC GATTACTTAT TTTGATAAAG CACTAAATGT TGACCCTAAC 
TTTGAATTTG CACGGTCAGG TAAAATAAAT GCAGAAAAAG AACTTAATAA ATAA 

 

Protein sequence

MKIKQYILLL ILTTSLILTS GCLDEIINKD SPDSLNKVGL EYYNSFDYQT AITYFDKAIE 
VDSKFKESWY NKGNSLNALQ RYDEAIFCFD KALELDPNNH YYLSSKGYSL NSLQRYDEAI 
FCYSKALDSE PNNSYYLSGK GYALYYGRNK EEAVTYFDKA IESDPNYAYA WYFKGNIYYE 
SGEYQTAITY FDKALNVDPN FEFARSGKIN AEKELNK