Gene Mevan_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_0227 
Symbol 
ID5324990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand- 
Start bp270468 
End bp271097 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content27% 
IMG OID640785890 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_001322748 
Protein GI150398981 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.279714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGT CTCAAAATTC TTTTAATAAT TTTGAAGGAT TCAATGAAAA TGAATATTAC 
ATAACTCCTT CAGAAATGCT TGAATTTTTG TATTGTAAAC GATATACCTA CTTTATGAAT 
TATTTGGGAA TAAGCCAGCA TGAAGAAAAA CGGTACAAAG TTTTAAAGGG TAGAACAATT 
CATGAAAAAA AGGAGTTAGA AAATGCGAAC TACTTACGTA AAAAAATAAA CGTGGTTGAC 
AAAAAAATAA ACGTTTCAAT GGTTTCGAAA AACTATGGTA TTAAAGGGAT TGCCGATGAA 
GTTTTAACAC TTTCAAACGG AACCATGGCT TCACTCGATT ACAAATTTGC TGAGTACAAT 
GACATAATAT ATAAAACATA TAAAATGCAA ACTATAATGT ACTCTTTAAT GATAGCTGAA 
ACTTTTAATG CAGAAGTTAC ACAAGGATAT ATATTATATT GTCGTGGAAA AAATGTCTTA 
AAAGAAATAG AAGTGAATAT AAAAGAAATA AATAAGCTGA ATAAATATTT AGAGGAGTTT 
AAAAAAGTAA TGTCTGGACA TTACCCAAAA TCAGCGTCAA ATAAATTAAA ATGTATTGAT 
TGTTGTTATA AAAATATTTG TGTAAAATAA
 
Protein sequence
MKSSQNSFNN FEGFNENEYY ITPSEMLEFL YCKRYTYFMN YLGISQHEEK RYKVLKGRTI 
HEKKELENAN YLRKKINVVD KKINVSMVSK NYGIKGIADE VLTLSNGTMA SLDYKFAEYN 
DIIYKTYKMQ TIMYSLMIAE TFNAEVTQGY ILYCRGKNVL KEIEVNIKEI NKLNKYLEEF 
KKVMSGHYPK SASNKLKCID CCYKNICVK