| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2691 |
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| Symbol | |
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| ID | 5315956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | - |
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| Start bp | 2790541 |
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| End bp | 2792163 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640780800 |
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| Product | choline transporter |
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| Protein accession | YP_001317800 |
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| Protein GI | 150395125 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAG AGAAAGTTAT GGACTGGACG ACCTTTATAG GGACAGTAGC TGTACTTCTT
TTTGCAGTTA TACCTATGAT GGCTTTTCCA AAAGCAAGTG AAGATATCAT CACTGGTATT
AATAGTGCCA TTTCTGATTC AATTGGTTCG ATATATTTAT TTATGGGGCT GGCGATTTTT
TGCTTTGTAA TGTATATCGC ATTTGGTAAA TATGGTAATG TCACACTTGG TAAAGCAAGT
GATAAACCAG AATTTAATAC ATTTACATGG GCGGCAATGC TGTTTTGTGC AGGCATAGGC
TCTGATATTT TATACTGGGG CGTTATTGAA TGGGCTTTTT ACTATCAAGT TCCACCAAAT
GGCGCGAAAA GTATGAGTGA TGAAGCACTC CAATATGCGA CGCAATATGG TATGTTCCAC
TGGGGACCAA TTGCTTGGGC TATTTACGTT TTACCAGCAT TACCAATTGG TTATTTAGTG
TTTGTTAAAA AACAACCGGT GTATAAAATT AGTCAAGCTT GTCGTCCGAT TTTAAAAGGT
CAAACAGATA AATTTGTAGG TAAAGTTGTA GATATCTTAT TTATCTTTGG ATTGCTAGGT
GGTGCGGCAA CATCACTAGC GTTAGGTGTG CCATTAATTT CTGCAGGCAT AGAAAGATTA
ACTGGTTTAG ATGGTAAAAA TATGATTTTA CGTTCGGCTA TTTTATTAAC GATTACGGTC
ATATTTGCTA TTAGTTCATA TACAGGATTG AAAAAAGGTA TTCAAAAGTT AAGTGATATC
AACGTTTGGC TATCATTTGT ACTTTTAGCC TTTATATTTA TTATTGGACC GACTGTTTTT
ATTATGGAAA CGACAGTGAC AGGGTTCGGA AATATGTTGA GAGATTTTTT CCATATGGCA
ACATGGTTAG AACCATTCGG TGGTATTAAA GGTCGAAAAG AAACGAATTT CCCACAAGAC
TGGACAATAT TCTACTGGTC ATGGTGGTTA GTATATGCGC CATTTATCGG TTTATTTATC
GCTAGAATTT CAAAAGGTAG ACGCCTTAAA GAAGTCGTGC TAGGAACAAT TATTTATGGA
ACGCTTGGAT GCGTATTATT CTTTGGTATT TTTGGTAACT ATGCTGTGTA TTTACAAATT
TCTGGACAGT TTAATGTAAC ACAATATTTA AATACACATG GTACAGAGGC AACCATTATT
GAAGTGGTGC ATCATTTACC ATTCCCATCA TTGATGATTG TACTATTCTT AGTATCTGCT
TTCTTATTCT TAGCAACAAC ATTTGATTCG GGTTCATATA TTTTAGCGGC AGCATCTCAG
AAAAAAGTGG TAGGCGAACC ATTACGTGCC AATCGTTTAT TCTGGGCATT TGCATTGTGC
TTATTGCCAT TTTCATTGAT GCTAGTTGGT GGCGAACGTG CATTAGAAGT ATTGAAAACT
GCTTCAATAC TGGCAAGTGT GCCATTAATT GTTATTTTTA TTTTCATGAT GATATCATTT
TTAATCATTT TAGGGCGCGA TAGAATTAAA CTTGAAACGC GTGCTGAAAA ATTAAAAGAA
GTTGAACGTC GTTCATTGCG AATCGTTCAA GTATCAGAAG AAGAACAAGA CGATAATTTA
TAA
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| Protein sequence | MKKEKVMDWT TFIGTVAVLL FAVIPMMAFP KASEDIITGI NSAISDSIGS IYLFMGLAIF
CFVMYIAFGK YGNVTLGKAS DKPEFNTFTW AAMLFCAGIG SDILYWGVIE WAFYYQVPPN
GAKSMSDEAL QYATQYGMFH WGPIAWAIYV LPALPIGYLV FVKKQPVYKI SQACRPILKG
QTDKFVGKVV DILFIFGLLG GAATSLALGV PLISAGIERL TGLDGKNMIL RSAILLTITV
IFAISSYTGL KKGIQKLSDI NVWLSFVLLA FIFIIGPTVF IMETTVTGFG NMLRDFFHMA
TWLEPFGGIK GRKETNFPQD WTIFYWSWWL VYAPFIGLFI ARISKGRRLK EVVLGTIIYG
TLGCVLFFGI FGNYAVYLQI SGQFNVTQYL NTHGTEATII EVVHHLPFPS LMIVLFLVSA
FLFLATTFDS GSYILAAASQ KKVVGEPLRA NRLFWAFALC LLPFSLMLVG GERALEVLKT
ASILASVPLI VIFIFMMISF LIILGRDRIK LETRAEKLKE VERRSLRIVQ VSEEEQDDNL
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