Gene SaurJH1_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_2238 
Symbol 
ID5316781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp2339490 
End bp2340833 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content30% 
IMG OID640780353 
Productmajor facilitator transporter 
Protein accessionYP_001317353 
Protein GI150394678 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000374432 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTAA AGTCAATCAT AACTGTTATA GCTTTAATAT TAATTATGTT TATGTCAGCG 
ATTGAATCAT CTATTATTTC GCTTGCATTA CCTACAATTA AACAAGATTT AAATGCAGGA
AATTTAATTT CATTAATTTT TACAGCGTAT TTTATCGCAT TAGTAATTGC CAATCCTATA
GTGGGAGAAT TACTTTCGAG ATTTAAAATT ATTTATGTGG CAATTGCAGG ATTACTTTTA
TTTAGTATAG GTAGTTTTAT GTGTGGTTTA AGTACTAATT TTACTATGCT AATTATATCA
CGCGTGATAC AAGGTTTTGG ATCAGGTGTA TTGATGTCAT TATCGCAAAT TGTTCCAAAG
TTAGCATTTG AAATTCCGTT ACGATATAAA ATTATGGGCA TAGTTGGCAG TGTTTGGGGT
ATTTCGAGTA TCATTGGACC GCTTCTAGGT GGTGGTATAT TAGAATTTGC AACATGGCAT
TGGTTATTCT ACATAAATAT ACCGATTGCG ATCATTGCCA TTATATTAGT TATATGGACA
TTTCATTTTC CAGAGGAAGA AACAGTTGCT AAATCAAAAT TTGATACTAA AGGGCTCACG
CTATTTTATG TATTTATTGG ATTGATTATG TTTGCTTTAT TAAACCAACA GCTATTACTT
TTAAATTTCT TGAGTTTTAT CTTAGCTATC GTTGTGGCAA TGTGTTTATT TAAAGTAGAA
AAACATGTTT CTTCACCATT TTTACCTGTG GTTGAATTTA ATCGTTCGAT TACTTTAGTT
TTTATAACGG ACCTTCTAAC AGCTATTTGT TTAATGGGAT TCAATTTATA TATTCCAGTC
TACCTTCAAG AACAACTAGG ATTATCTCCA TTGCAAAGTG GATTGGTTAT TTTTCCTTTA
TCTGTAGCTT GGATTACATT GAATTTTAAT TTACATCGAA TTGAAGCAAA ACTATCAAGG
AAAGTTATTT ACTTACTATC ATTTACATTG TTACTAGTAA GTAGTATTAT CATTTCATTT
GGTATTAAAT TGCCGGTACT TATAGCATTT GTGTTAATTT TGGCAGGATT AAGTTTTGGA
TATATTTATA CGAAAGATAG TGTAATTGTC CAAGAGGAAA CTAGCCCATT ACAAATGAAG
AAAATGATGT CATTTTATGG ATTAACTAAA AATCTTGGGG CATCAATAGG TTCAACAATA
ATGGGATATC TTTATGCGAT ACAATCAGGA ATCTTTGGTC CAAACTTACA CAATGTGTTA
AGTGCTGTTG CTGTAATTAG CATTGGGCTT ATTGTTTTAT GGGTCGTATT TTTTAAAGAA
CAGTCATCTC AATCAAAAGA ATAG
 
Protein sequence
MRLKSIITVI ALILIMFMSA IESSIISLAL PTIKQDLNAG NLISLIFTAY FIALVIANPI 
VGELLSRFKI IYVAIAGLLL FSIGSFMCGL STNFTMLIIS RVIQGFGSGV LMSLSQIVPK
LAFEIPLRYK IMGIVGSVWG ISSIIGPLLG GGILEFATWH WLFYINIPIA IIAIILVIWT
FHFPEEETVA KSKFDTKGLT LFYVFIGLIM FALLNQQLLL LNFLSFILAI VVAMCLFKVE
KHVSSPFLPV VEFNRSITLV FITDLLTAIC LMGFNLYIPV YLQEQLGLSP LQSGLVIFPL
SVAWITLNFN LHRIEAKLSR KVIYLLSFTL LLVSSIIISF GIKLPVLIAF VLILAGLSFG
YIYTKDSVIV QEETSPLQMK KMMSFYGLTK NLGASIGSTI MGYLYAIQSG IFGPNLHNVL
SAVAVISIGL IVLWVVFFKE QSSQSKE