Gene SaurJH1_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_2192 
SymbolprfA 
ID5317145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp2274637 
End bp2275713 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content35% 
IMG OID640780299 
Productpeptide chain release factor 1 
Protein accessionYP_001317308 
Protein GI150394633 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.267751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGATC AATTAGATAT TGTAGAAGAA AGATACGAAC AGTTAAATGA ACTGTTAAGT 
GACCCAGATG TTGTAAATGA TTCAGATAAA TTACGTAAAT ATTCTAAAGA GCAAGCTGAT
TTACAAAAAA CTGTAGATGT TTATCGTAAC TATAAAGCTA AAAAAGAAGA ATTAGCTGAT
ATTGAAGAAA TGTTAAGTGA GACTGATGAT AAAGAAGAAG TAGAAATGTT AAAAGAGGAG
AGTAATGGTA TTAAAGCTGA ACTTCCAAAT CTTGAAGAAG AGCTTAAAAT ATTATTGATT
CCTAAAGATC CTAATGATGA CAAAGACGTT ATTGTAGAAA TAAGAGCAGC AGCAGGTGGT
GATGAGGCTG CGATTTTTGC TGGTGATTTA ATGCGTATGT ATTCAAAGTA TGCTGAATCA
CAAGGATTCA AAACTGAAAT AGTAGAAGCG TCTGAAAGTG ACCATGGTGG TTACAAAGAA
ATTAGTTTCT CAGTTTCTGG TAATGGCGCG TATAGTAAAT TGAAATTTGA AAATGGTGCG
CACCGCGTTC AACGTGTGCC TGAAACAGAA TCAGGTGGAC GTATTCATAC TTCAACAGCT
ACAGTGGCAG TTTTACCAGA AGTTGAAGAT GTAGAAATTG AAATTAGAAA TGAAGATTTA
AAAATCGACA CGTATCGTTC AAGTGGTGCA GGTGGTCAGC ACGTAAACAC AACTGACTCT
GCAGTACGTA TTACCCATTT ACCAACTGGT GTCATTGCAA CATCTTCTGA GAAGTCTCAA
ATTCAAAACC GTGAAAAAGC AATGAAAGTG TTAAAAGCAC GTTTATACGA TATGAAAGTT
CAAGAAGAAC AACAAAAGTA TGCGTCACAA CGTAAATCAG CAGTCGGTAC TGGTGATCGT
TCAGAACGTA TTCGAACTTA TAATTATCCA CAAAGCCGTG TAACAGACCA TCGTATAGGT
CTAACGCTTC AAAAATTAGG GCAAATTATG GAAGGCCATT TAGAAGAAAT TATAGATGCA
CTGACTTTAT CAGAGCAGAC AGATAAATTG AAAGAACTTA ATAATGGTGA ATTATAA
 
Protein sequence
MFDQLDIVEE RYEQLNELLS DPDVVNDSDK LRKYSKEQAD LQKTVDVYRN YKAKKEELAD 
IEEMLSETDD KEEVEMLKEE SNGIKAELPN LEEELKILLI PKDPNDDKDV IVEIRAAAGG
DEAAIFAGDL MRMYSKYAES QGFKTEIVEA SESDHGGYKE ISFSVSGNGA YSKLKFENGA
HRVQRVPETE SGGRIHTSTA TVAVLPEVED VEIEIRNEDL KIDTYRSSGA GGQHVNTTDS
AVRITHLPTG VIATSSEKSQ IQNREKAMKV LKARLYDMKV QEEQQKYASQ RKSAVGTGDR
SERIRTYNYP QSRVTDHRIG LTLQKLGQIM EGHLEEIIDA LTLSEQTDKL KELNNGEL