| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1688 |
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| Symbol | |
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| ID | 5316488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | - |
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| Start bp | 1752989 |
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| End bp | 1753795 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640779770 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001316823 |
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| Protein GI | 150394148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.8714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTG CAGTTATCGG AAATCCTATT TCACATTCCT TGTCGCCCGT TATGCATAGA
GCAAATTTTA ATTCTTTAGG ATTAGATGAT ACTTATGAAG CTTTAAATAT TCCAATTGAA
GATTTTCATT TAATTAAAGA AATTATTTCG AAAAAAGAAT TAGATGGCTT TAATATCACA
ATTCCTCATA AAGAACGTAT CATACCGTAT TTAGATTATG TTGATGAACA AGCGATTAAT
GCAGGTGCAG TTAACACTGT TTTGATAAAA GATGGCAAGT GGATAGGGTA TAATACAGAT
GGTATTGGTT ATGTTAAAGG ATTGCACAGC GTTTATCCAG ATTTAGAAAA TGCATACATT
TTAATTTTGG GCGCAGGTGG TGCAAGTAAA GGTATTGCTT ATGAATTAGC AAAATTTGTA
AAGCCCAAAT TAACTGTTGC GAATAGAACG ATGGCTCGTT TTGAATCTTG GAATTTAAAT
ATAAACCAAA TTTCATTGGC AGATGCTGAA AAGTATTTAG CTGAATTCGA TATCGTTATT
AATACAACAC CAGCGGGTAT GGCTGGAAAT AACGAAAGTA TTATTAATTT AAAACATCTT
TCTCCCAATA CTTTAATGAG TGATATTGTT TATATACCGT ATAAAACACC TATTTTAGAG
GAAGCAGAGC GCAAGGGAAA CCATATTTAT AATGGCTTAG ATATGTTTGT TTACCAAGGT
GCGGAAAGCT TTAAAATTTG GACTAATAAA GATGCTGATA TTAATTCTAT GAAAACAGCA
GTTTTACAAC AATTAAAAGG AGAATAA
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| Protein sequence | MKFAVIGNPI SHSLSPVMHR ANFNSLGLDD TYEALNIPIE DFHLIKEIIS KKELDGFNIT
IPHKERIIPY LDYVDEQAIN AGAVNTVLIK DGKWIGYNTD GIGYVKGLHS VYPDLENAYI
LILGAGGASK GIAYELAKFV KPKLTVANRT MARFESWNLN INQISLADAE KYLAEFDIVI
NTTPAGMAGN NESIINLKHL SPNTLMSDIV YIPYKTPILE EAERKGNHIY NGLDMFVYQG
AESFKIWTNK DADINSMKTA VLQQLKGE
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