Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1641 |
Symbol | |
ID | 5317663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 1707995 |
End bp | 1709458 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640779723 |
Product | rhomboid family protein |
Protein accession | YP_001316776 |
Protein GI | 150394101 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.423795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAG ACAAACAATT TTGGAAAACA ATATATTATT GGATTAGGTA CTTGAATTTT GATATTGTCA ATAGGGAAAA AGATGACCAA GAAATTTGGT TAGCCCATAA AAGAAAAAAA CAAGTAGTCA TTTTTAAACA ACATATCAAG TCTACCCAAG AAATACGTTT TGACAAAGCG AAAGTGCTTG AACACAAAGA TGAAATAGCA AATTTTATTT CTTTCGAACC ACAAAGTTTT GAATTTTATT ATTTTACAGA ATCGGAATTT TCAGAAGAAC AATTAAATGA AGTTTCGCCA ATTAGAATTA AATTCAATGT TATAAGACAC ACAAAAGATT TGATAAAGCA TATGCCGAAT ATATTTTTGG CTAGACTTAT TTCAGAAGAT AATGATAAAA AGACATATAT GTTCTATAAA CGCAAAGTAT TAACCGATAA CTTTTTAGAT AAATATATGC AGAAATTTTC ACCGGCAACA TACACAATAA TATTTGTAAA TGTCTTAATA TGGTTATGTA TGATTTTATA TTTAAATAAT TTTTCGGATG TAAAATTATT AGATGTTGGC GGGTTAGTGC ATTTTAATGT CGTACATGGT GAATGGTATC GAATTGTTAC ATCGATGTTT TTACATTTTA GTTTTGAACA TATACTTATG AATATGCTTT CATTATTTAT TTTTGGTAAA ATAGTCGAAG CAATTATTGG TTCATGGCGG ATGTTAACTG TATACTTTAT TGCAGGGTTG TTTGGAAACT TTGTATCACT ATCATTTAAT ACGACTACAA TTTCAGTTGG GGCTAGTGGT GCTATATTTG GTCTGATTGG ATCAATTTTT GCGATGATGT ATGTTTCAAA AACATTTAAC AAAAAAATGT TAGGACAGTT ATTAATTGCA TTAGTGATAT TAGTTGGTGT TTCTCTGTTT ATGTCAAATA TAAATATTGT GGCGCATATT GGAGGATTCA TTGGTGGTTT ATTAATAACT TTAATTGGCT ATTACTATAA AGTGAATCGT AATATTTTTT GGATTTTACT AATTGGTATG CTTGTTATAT TTATTGCACT TCAAATTAGA ATTTTTACAA TTAAAGAAGA TAATATTTAT AATAAATTGA TCAAAGATGA TATGACTAGT GGTAATTATG ATAATGCTCA AAATATTGTG AAGCAGACAA TAAATAAAAA TTATGCCGAT GATCAAACAT ATTATTTAAG TGGTATGATT ATGGCTACTA TCAATTCTAA GTCCGAAGGT ATGACAGAAT GGGAGCGAGG ACTTAGAATG TTTCCTAAAT CAGGTTTATT AAATTTTGAG TTAGCGATAG CAAATCGTTC ATTAAATGAT GATGAAAAAG CATTAAAATA TGTGCGTAAA GCATTAAATG CAGACCCTAA AAATACAGAT TATATTAACT TAGAAAAAGA GTTGACTAAA TCAAATGAGT CGAAAAATAA ATAA
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Protein sequence | MNIDKQFWKT IYYWIRYLNF DIVNREKDDQ EIWLAHKRKK QVVIFKQHIK STQEIRFDKA KVLEHKDEIA NFISFEPQSF EFYYFTESEF SEEQLNEVSP IRIKFNVIRH TKDLIKHMPN IFLARLISED NDKKTYMFYK RKVLTDNFLD KYMQKFSPAT YTIIFVNVLI WLCMILYLNN FSDVKLLDVG GLVHFNVVHG EWYRIVTSMF LHFSFEHILM NMLSLFIFGK IVEAIIGSWR MLTVYFIAGL FGNFVSLSFN TTTISVGASG AIFGLIGSIF AMMYVSKTFN KKMLGQLLIA LVILVGVSLF MSNINIVAHI GGFIGGLLIT LIGYYYKVNR NIFWILLIGM LVIFIALQIR IFTIKEDNIY NKLIKDDMTS GNYDNAQNIV KQTINKNYAD DQTYYLSGMI MATINSKSEG MTEWERGLRM FPKSGLLNFE LAIANRSLND DEKALKYVRK ALNADPKNTD YINLEKELTK SNESKNK
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