| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1485 |
|---|
| Symbol | |
|---|
| ID | 5315752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 1526457 |
|---|
| End bp | 1527344 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640779568 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001316621 |
|---|
| Protein GI | 150393946 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACATT TATTTGAGGG TGTTGGCGTT GCACTTACAA CCCCTTTTAC AAATAACAAA
GTTAATCTTG AAGCTTTGAA AGCACACGTT AATTTTTTAC TAGAAAATAA TGCCCAAGCA
ATCATCGTTA ATGGAACTAC TGCTGAGAGC CCTACTTTAA CAACAGATGA AAAAGAACGC
ATTCTAAAAA CAGTTATTGA TCTTGTAGAT AAACGTGTTC CTGTCATAGC TGGAACTGGA
ACTAATGATA CTGAAAAGTC AATCCAAGCT TCATTCCAAG CTAAAGCCTT AGGGGCTGAT
GCAATTATGT TAATTACGCC CTACTACAAC AAAACGAACC AACGTGGTTT AGTCAAACAC
TTTGAAGCGA TTACAGATGC TGTGAAATTA CCAGTCGTGC TGTACAATGT TCCTTCAAGA
ACGAACATGA CAATTGAACC AGAAACTGTA GAAATATTAA GTCAACATCC TTATATAGTT
GCTTTAAAAG ATGCTACGAA TGATTTTGAG TATTTAGAAG AAGTGAAAAA GCGAATTGAT
ACAAATTCAT TTGCATTATA TAGTGGCAAT GATGACAACG TCGTCGAATA CTATCAACGT
GGCGGTCAAG GGGTTATCTC TGTTATTGCC AATGTCATTC CTAAAGAATT TCAAGCGTTA
TACGATGCTC AACAAAGTGG ATTAGATATT CAAGATCAAT TTAAACCAAT CGGCACACTG
TTATCAGCCC TATCAGTTGA TATTAACCCA ATTCCTATTA AAGCTTTAAC AAGTTATTTA
GAATTTGGAA ACTATGAATT ACGTTTACCA TTGGTTAGCC TAGAAGATAC AGATACTAAA
GTGCTTCGTG AAGCATATGA CACATTTAAA GCGGGTGAAA ATGAGTGA
|
|---|
| Protein sequence | MTHLFEGVGV ALTTPFTNNK VNLEALKAHV NFLLENNAQA IIVNGTTAES PTLTTDEKER
ILKTVIDLVD KRVPVIAGTG TNDTEKSIQA SFQAKALGAD AIMLITPYYN KTNQRGLVKH
FEAITDAVKL PVVLYNVPSR TNMTIEPETV EILSQHPYIV ALKDATNDFE YLEEVKKRID
TNSFALYSGN DDNVVEYYQR GGQGVISVIA NVIPKEFQAL YDAQQSGLDI QDQFKPIGTL
LSALSVDINP IPIKALTSYL EFGNYELRLP LVSLEDTDTK VLREAYDTFK AGENE
|
|---|
| |