Gene SaurJH1_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1307 
Symbol 
ID5316679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand+ 
Start bp1330585 
End bp1331226 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content33% 
IMG OID640779394 
Producthypothetical protein 
Protein accessionYP_001316447 
Protein GI150393772 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00543871 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAA ATTTATTATG TTCTAATCGA CACTTGCCGC AAGATATTTG GGCCAAAAGT 
AATGAAGGTA AATGGGGCGG CGTTGATAGA GGTGCTTTGA TTTTATTGAA GCATCAAATT 
ATCCCTTTTT TCTCAGTGGG AGACTTTGAT TCAGTCAGTA AAGAAGAACG CCAACTTCTA 
ACAGAACAGT TACAAATCAA ACCAGTTCAA GCTGAAAAAG CTGATACGGA TTTAGCTTTA 
GCGGTTGATA AAGCTGTTGC ACTTGGATTT GATAGTATTA CAATTTATGG TGCAACAGGC 
GGACGATTAG ATCACTTTTT TGGGGCAATT CAGTTATTAT TGAAAAAAGC ATATTATAAA 
CATGATGTTC ATATAGAAGT TATCGATCAA CAAAATAAAA TTGAATTATT GCCTAAAGGT 
CAACATACAG TTGAAAAAGA TAAGAGTTAT CCGTACATTT CATTTATACC GATGACTGAT 
GATGTAGAAC TTTCTCTAGC AGGTTTTAAA TATAATTTAG CTAGACAAAT GCTTAATATA 
GGTTCTACTT TAACTATTTC AAATGAAATT GAGTCTTTGC AAGCGAAAGT AACTGTACAT 
GATGGGTTGA TTTTGCAAAT TAGAAGTACA GATTTAAATT AA
 
Protein sequence
MHINLLCSNR HLPQDIWAKS NEGKWGGVDR GALILLKHQI IPFFSVGDFD SVSKEERQLL 
TEQLQIKPVQ AEKADTDLAL AVDKAVALGF DSITIYGATG GRLDHFFGAI QLLLKKAYYK 
HDVHIEVIDQ QNKIELLPKG QHTVEKDKSY PYISFIPMTD DVELSLAGFK YNLARQMLNI 
GSTLTISNEI ESLQAKVTVH DGLILQIRST DLN