Gene SaurJH1_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1012 
Symbol 
ID5315180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1046668 
End bp1047630 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content28% 
IMG OID640779099 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001316155 
Protein GI150393480 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0445446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAT TAATACTTAA AAGGTTAGGG TTAATGATCC CGTTACTAAT TTTAATCTCA 
ATAGTTGTAT TTTCATTAGC AATCATACAA CCAGGAGATC CATTTTCAGA TTTACAAAAC
GGTAAAATAA AACAAGAAGC AATAAATGCA CAAAGGGAAA AGTTAGGCCT CAACGACTCA
ATACCACATC AATATATTAG ATGGGTCAAT CATGTTATAC ATGGTGATTT AGGGGAGTCA
ATCAAATATA AGAGGCCGGT AATTGATGTT ATTGAGGAAA GAATTCCAAA TACAATATTA
CTCGGTGCTA TGTCATTAAT TATTACTTAT ATTATCTCAT TTGCTTTAGG AATAACGTCA
GGTAGATATT CTTACAGTTT GACTGATTAT ACTGTGCAAA TATTTAATTA TTTGATGTTA
GCTATTCCAT CTTTTATTGC GGGAGTATTT GCAATTTTTA TTTTTTCTTT TGAATTACAA
TGGTTTCCGT TTCAAGGTTC TGTTGATATT AACCTTAAAG AAGGTACTTT TGAATATTAT
ATGAGTAAAA TTTATCATAC ATTTTTGCCT GCATTAACTT TAGGATTATT ATCTACTGCT
GGTTATATTC AATATTTACG TAATGATATT ATTGAAAATT CTAAAAAAGA TTATGTATTG
ACGGCAAGGT CAAAAGGATT ATCTATGAAT AAAATTTATA ATAAACATAT ATTGAGAAAT
TCTTTAATAC CTATTATTAC ATTTTTAGGT GCTGATATTG TAAGTATTTT AGGTGGAGCT
GTGATTACTG AGACTATCTT TTCATATAAC GGTATCGGTA AATTATTTTT AGAATCGGTA
ATAGGTCAAG ACTATCCATT AATGATGGCA TTAACGTTAT TTTTCTCATT TTTAGGTTTA
TTGGGTAATT TGATTTCTGA TATTACTTAT GGATTTATAG ATCCAAGAAT TAGAAGTAAC
TAG
 
Protein sequence
MLKLILKRLG LMIPLLILIS IVVFSLAIIQ PGDPFSDLQN GKIKQEAINA QREKLGLNDS 
IPHQYIRWVN HVIHGDLGES IKYKRPVIDV IEERIPNTIL LGAMSLIITY IISFALGITS
GRYSYSLTDY TVQIFNYLML AIPSFIAGVF AIFIFSFELQ WFPFQGSVDI NLKEGTFEYY
MSKIYHTFLP ALTLGLLSTA GYIQYLRNDI IENSKKDYVL TARSKGLSMN KIYNKHILRN
SLIPIITFLG ADIVSILGGA VITETIFSYN GIGKLFLESV IGQDYPLMMA LTLFFSFLGL
LGNLISDITY GFIDPRIRSN